Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL353705.4-201ENST00000449661 238 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 RPL17P19-201ENST00000489069 552 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 RPS29P21-201ENST00000496272 170 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 RNA5SP112-201ENST00000515937 99 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AC079598.5-201ENST00000547460 117 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AC016256.1-201ENST00000547971 354 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AC078899.3-201ENST00000599065 212 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 AL359198.2-201ENST00000611836 194 ntBASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TRIM43Q96BQ3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AP000560.1-201ENST00000624150 1937 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 RNU6-595P-201ENST00000363944 107 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 MIR548P-201ENST00000408336 84 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 CYCSP48-201ENST00000417124 323 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC097463.2-201ENST00000421074 142 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC243428.1-201ENST00000421099 264 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 BX679664.1-201ENST00000434429 253 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 Y_RNA.631-201ENST00000459607 101 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC010401.1-201ENST00000463867 348 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 RN7SL283P-201ENST00000489055 303 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC109329.2-201ENST00000519658 482 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AL442663.2-201ENST00000554385 511 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC060766.3-201ENST00000591442 263 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 Z75746.1-201ENST00000440243 2080 ntBASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.03□□□□□ -1.92
TRIM43Q96BQ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNU6-1115P-201ENST00000362490 106 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNU6-486P-201ENST00000363116 107 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 SNORA63-201ENST00000363450 132 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNU6-1285P-201ENST00000363480 105 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNU6-805P-201ENST00000365643 106 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 Y_RNA.395-201ENST00000383945 109 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 SNORD21-201ENST00000383953 95 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNU1-57P-201ENST00000384491 166 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 MIR559-201ENST00000385188 96 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNU6-700P-201ENST00000391043 107 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNA5SP274-201ENST00000410484 108 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RN7SKP123-201ENST00000410732 291 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 AC096725.1-201ENST00000514266 313 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 SNORA25.11-201ENST00000515935 105 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 RNA5SP217-201ENST00000515959 91 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 AL590705.4-201ENST00000532209 134 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 MRPS36P4-201ENST00000534436 298 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 SNRPGP18-201ENST00000553000 214 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 AC021231.3-201ENST00000558497 370 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 AL159153.1-201ENST00000619688 317 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 MIR7515-201ENST00000637837 67 ntBASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TRIM43Q96BQ3 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 RNU4-56P-201ENST00000364700 142 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 RNU4-9P-201ENST00000364951 139 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 Y_RNA.428-201ENST00000384078 102 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 Y_RNA.463-201ENST00000384271 102 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 MIR186-201ENST00000384988 86 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 Z98742.3-201ENST00000418637 326 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AL590135.1-201ENST00000422215 156 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AC019205.3-201ENST00000424573 156 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AC016700.2-201ENST00000446011 156 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 RN7SKP210-201ENST00000459176 261 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AC015911.1-201ENST00000495111 156 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AIG1P1-201ENST00000503376 148 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 Y_RNA.661-201ENST00000516003 99 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 RNU6-120P-201ENST00000516077 103 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 SUB1P3-201ENST00000564581 315 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 AL353621.2-201ENST00000605340 133 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 SNORA43.4-201ENST00000629559 138 ntBASIC3.01□□□□□ -1.93
TRIM43Q96BQ3 MTND4P27-201ENST00000450813 1354 ntBASIC3□□□□□ -1.93
TRIM43Q96BQ3 RNA5SP289-201ENST00000362332 137 ntBASIC3□□□□□ -1.93
TRIM43Q96BQ3 RNU6-655P-201ENST00000362858 107 ntBASIC3□□□□□ -1.93
TRIM43Q96BQ3 RNU6-529P-201ENST00000363383 104 ntBASIC3□□□□□ -1.93
TRIM43Q96BQ3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3□□□□□ -1.93
TRIM43Q96BQ3 AC099799.1-201ENST00000439809 192 ntBASIC3□□□□□ -1.93
TRIM43Q96BQ3 Z96811.1-201ENST00000445880 108 ntBASIC3□□□□□ -1.93
TRIM43Q96BQ3 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3□□□□□ -1.93
TRIM43Q96BQ3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms