Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 PCNPP3-201ENST00000393579 471 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.592-201ENST00000410274 109 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 RNU2-25P-201ENST00000411041 191 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 RNU2-71P-201ENST00000411395 189 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 PIGPP3-201ENST00000425307 415 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 AC092423.1-201ENST00000430165 186 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 NDUFB1P2-201ENST00000449477 176 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 AL139109.1-201ENST00000455491 297 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.89□□□□□ -1.95
SNHG28P0DPA3 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.89□□□□□ -1.95
SNHG28P0DPA3 RRN3P3-201ENST00000549207 578 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 AMZ2P1-203ENST00000565833 850 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 AC103988.1-201ENST00000566382 2177 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 AC098826.3-201ENST00000603823 466 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 AC009779.6-201ENST00000603972 165 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 AC098479.1-201ENST00000609225 154 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.89□□□□□ -1.95
SNHG28P0DPA3 IGHVIII-44-202ENST00000636235 289 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.89□□□□□ -1.95
SNHG28P0DPA3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 RNU6-600P-201ENST00000362524 99 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 RNU6-827P-201ENST00000365553 106 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AL591034.2-201ENST00000402839 359 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 SNORD56-201ENST00000413522 71 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 MTCO1P39-201ENST00000426148 480 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 MTCO3P29-201ENST00000432119 779 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 RPL9P9-202ENST00000466501 579 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AC133134.1-201ENST00000466800 359 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AC008716.1-201ENST00000511084 513 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 RNU6-927P-201ENST00000516199 100 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AC069113.1-201ENST00000517763 267 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AC034114.1-201ENST00000520293 285 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 CKS1BP7-201ENST00000522230 235 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AC103996.1-201ENST00000555468 102 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AL161798.1-201ENST00000604630 131 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 FTX_2.1-201ENST00000618816 94 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AL450472.1-202ENST00000637286 180 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AC004925.1-201ENST00000624256 2706 ntBASIC2.88□□□□□ -1.95
SNHG28P0DPA3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SNHG28P0DPA3 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
SNHG28P0DPA3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.87□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.183-201ENST00000363882 113 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 RNU4-50P-201ENST00000364361 141 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 RNA5SP126-201ENST00000365092 109 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.785-201ENST00000384290 109 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
SNHG28P0DPA3 SNORD58.1-201ENST00000391313 66 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.87□□□□□ -1.95
SNHG28P0DPA3 AL096701.2-201ENST00000416920 238 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 AC079354.2-201ENST00000453523 154 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 RPS29P27-201ENST00000463711 170 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.87□□□□□ -1.95
SNHG28P0DPA3 ACA59.1-201ENST00000515966 143 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 MIR892C-201ENST00000516410 77 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 SNORA40.15-201ENST00000516884 107 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 RNU7-4P-201ENST00000516961 62 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 RNU6-840P-201ENST00000517275 65 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 MIR1273C-201ENST00000578669 77 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.87□□□□□ -1.95
SNHG28P0DPA3 BDH2P1-201ENST00000602288 736 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 AC002076.2-201ENST00000617362 122 ntBASIC2.87□□□□□ -1.95
SNHG28P0DPA3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AC002546.1-201ENST00000588041 2504 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AL353746.1-201ENST00000566293 6881 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 RNU6-187P-201ENST00000384139 106 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 Y_RNA.515-201ENST00000384535 112 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 SNORA19-201ENST00000384737 128 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 MIR625-201ENST00000385047 85 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 RNU1-101P-201ENST00000391171 127 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AL603910.2-201ENST00000407268 136 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 MIR548M-201ENST00000408260 86 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 SNORA11.2-201ENST00000408318 127 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 RNU2-20P-201ENST00000410425 191 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 TOMM22P1-201ENST00000418578 312 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 MTND3P9-201ENST00000429526 346 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 SSXP4-201ENST00000451349 245 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.86□□□□□ -1.95
SNHG28P0DPA3 RPL23AP45-201ENST00000476406 468 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AL049874.1-201ENST00000489560 388 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AC139453.3-201ENST00000493276 369 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 RN7SKP282-201ENST00000516824 299 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 RNU6-255P-201ENST00000516957 105 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 AC084851.1-201ENST00000529105 249 ntBASIC2.86□□□□□ -1.95
SNHG28P0DPA3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms