Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL121890.1-201ENST00000435457 205 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC107032.1-201ENST00000485945 480 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC087854.1-201ENST00000519706 414 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 MTND1P35-201ENST00000526739 508 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AL157687.1-201ENST00000554853 619 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC233702.2-202ENST00000562547 291 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 MIR5692C1-201ENST00000585309 91 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC018889.1-201ENST00000605372 397 ntBASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.402-201ENST00000383972 102 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 MIR29C-201ENST00000385231 88 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 RNU2-32P-201ENST00000411193 191 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AL137159.1-201ENST00000452808 512 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 RPL38P4-201ENST00000502376 214 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AC008628.2-201ENST00000502605 298 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 YWHAEP4-201ENST00000505390 198 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 RNU5F-2P-201ENST00000516066 82 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 RNU6-1069P-201ENST00000516612 133 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AP005597.4-201ENST00000526762 229 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AC109635.3-201ENST00000529536 185 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 HSPE1P4-201ENST00000550617 308 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 TPRKBP2-201ENST00000565969 475 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 MIR3136-201ENST00000583498 78 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AC007229.1-201ENST00000590455 412 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AL031274.2-201ENST00000599419 203 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AC009314.1-201ENST00000603871 304 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AL132822.1-201ENST00000617063 513 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.97□□□□□ -2.09
ATG4BQ9Y4P1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
ATG4BQ9Y4P1 Y_RNA.9-201ENST00000362354 101 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNY3P3-201ENST00000363816 102 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-944P-201ENST00000364023 107 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-1141P-201ENST00000364520 107 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNA5SP37-201ENST00000365420 130 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNU4-52P-201ENST00000384209 138 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 EIF4E2P1-201ENST00000393781 255 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNU4-26P-201ENST00000410270 107 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.615-201ENST00000410769 117 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 MTCO1P21-201ENST00000416634 589 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AL590556.1-201ENST00000423231 483 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 MRPS10P2-201ENST00000431226 381 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 SNAP23P1-201ENST00000433229 246 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC244670.1-201ENST00000436879 112 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC245102.2-201ENST00000448956 180 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-1332P-201ENST00000516666 104 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-965P-201ENST00000516721 96 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-667P-201ENST00000517186 102 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC107953.1-201ENST00000522216 297 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC064836.2-201ENST00000609491 462 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 AC022202.1-201ENST00000613515 211 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 SNORD98-201ENST00000636377 67 ntBASIC1.96□□□□□ -2.1
ATG4BQ9Y4P1 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC092881.1-201ENST00000638218 2733 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-451P-201ENST00000362921 107 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-1159P-201ENST00000362933 107 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 Y_RNA.167-201ENST00000363735 109 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 RNU6-522P-201ENST00000364497 107 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 U3.40-201ENST00000408706 208 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AL139156.1-201ENST00000412785 841 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AL590135.1-201ENST00000422215 156 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC019205.3-201ENST00000424573 156 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC078809.1-201ENST00000427601 140 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 MTCO2P3-201ENST00000442543 421 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC010095.1-201ENST00000443543 144 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC016700.2-201ENST00000446011 156 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC015911.1-201ENST00000495111 156 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC007375.1-201ENST00000554513 578 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 ZNF519P2-201ENST00000557032 169 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 BNIP3P25-201ENST00000596023 559 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 MIR219B-201ENST00000637023 88 ntBASIC1.95□□□□□ -2.1
ATG4BQ9Y4P1 AP000553.5-201ENST00000641933 54 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms