Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 SNORA12-201ENST00000391162 147 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RNU6-876P-201ENST00000391295 104 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 AL355497.1-201ENST00000406262 551 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 AC132942.1-201ENST00000486753 483 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RPS27P27-201ENST00000498779 255 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 PRDX4P1-201ENST00000507189 574 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 ACA59.1-201ENST00000515966 143 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 Y_RNA.682-201ENST00000516457 100 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 HSPE1P18-201ENST00000517602 280 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 MRPS36P4-201ENST00000534436 298 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 EIF4A1P12-201ENST00000551910 141 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 AC109446.1-201ENST00000566172 220 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 RPS3AP23-202ENST00000574601 686 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 SNRPGP17-201ENST00000603780 214 ntBASIC2.35□□□□□ -2.03
CMTM3Q96MX0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.35□□□□□ -2.03
CMTM3Q96MX0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 SNORD46.1-201ENST00000364139 104 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 RNU6-26P-201ENST00000383985 107 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 RNU6-968P-201ENST00000384076 107 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 RNA5SP171-201ENST00000391071 115 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 Z82205.1-201ENST00000428456 297 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AL513124.1-201ENST00000450410 614 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 RNA5SP137-201ENST00000516833 135 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AC233702.2-202ENST00000562547 291 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 MIR4790-201ENST00000577799 79 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 AC026271.5-201ENST00000577873 130 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 MIR5694-201ENST00000581190 76 ntBASIC2.34□□□□□ -2.03
CMTM3Q96MX0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CMTM3Q96MX0 AC233981.2-201ENST00000611524 1614 ntBASIC2.34□□□□□ -2.04
CMTM3Q96MX0 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.04
CMTM3Q96MX0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CMTM3Q96MX0 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
CMTM3Q96MX0 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.34□□□□□ -2.04
CMTM3Q96MX0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CMTM3Q96MX0 SNORD50.1-201ENST00000362987 71 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 MIR208B-201ENST00000401172 77 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 RN7SKP32-201ENST00000410167 303 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 MTND1P23-201ENST00000416931 372 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.33□□□□□ -2.04
CMTM3Q96MX0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AL137159.1-201ENST00000452808 512 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 RNU1-54P-201ENST00000517181 120 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AC243972.3-201ENST00000539655 198 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 DUXAP9-208ENST00000622815 614 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AC012640.5-201ENST00000623897 319 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 MIR1248-201ENST00000629190 106 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AL133216.2-202ENST00000634512 349 ntBASIC2.33□□□□□ -2.04
CMTM3Q96MX0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CMTM3Q96MX0 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 RNU6-845P-201ENST00000362578 103 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 RNA5SP494-201ENST00000410653 129 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 RNA5SP270-201ENST00000411361 118 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 RPL21P111-201ENST00000418453 477 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 EIF4EP2-201ENST00000422816 654 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 FTH1P25-201ENST00000447665 469 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 MTND5P5-201ENST00000503764 376 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AC008885.1-201ENST00000514930 301 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 MIR5004-201ENST00000579078 107 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 YPEL5P2-201ENST00000605553 359 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AP000654.2-201ENST00000605633 586 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 AC009994.1-201ENST00000606889 253 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 MIR6128-201ENST00000615528 109 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 MIR7112-201ENST00000616126 65 ntBASIC2.32□□□□□ -2.04
CMTM3Q96MX0 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CMTM3Q96MX0 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
CMTM3Q96MX0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
CMTM3Q96MX0 RNU6-1283P-201ENST00000365314 105 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 RNU6-596P-201ENST00000365395 98 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 RNU6-306P-201ENST00000384617 107 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 RNU6-1093P-201ENST00000391194 107 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 RPS26P42-201ENST00000413485 326 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 AC074085.1-201ENST00000413598 418 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 AL353705.4-201ENST00000449661 238 ntBASIC2.31□□□□□ -2.04
CMTM3Q96MX0 AC079354.2-201ENST00000453523 154 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms