Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RPL30P1-201ENST00000488676 339 ntBASIC2.56□□□□□ -2
TM4SF1P30408 AC108729.3-201ENST00000513484 108 ntBASIC2.56□□□□□ -2
TM4SF1P30408 SNORA48.11-201ENST00000517015 89 ntBASIC2.56□□□□□ -2
TM4SF1P30408 IMMP1LP2-201ENST00000552954 492 ntBASIC2.56□□□□□ -2
TM4SF1P30408 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
TM4SF1P30408 AC023043.2-201ENST00000589678 1026 ntBASIC2.56□□□□□ -2
TM4SF1P30408 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
TM4SF1P30408 AC009233.1-201ENST00000616477 371 ntBASIC2.56□□□□□ -2
TM4SF1P30408 MIR3688-2-201ENST00000636963 87 ntBASIC2.56□□□□□ -2
TM4SF1P30408 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.56□□□□□ -2
TM4SF1P30408 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
TM4SF1P30408 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.56□□□□□ -2
TM4SF1P30408 AP000560.1-201ENST00000624150 1937 ntBASIC2.56□□□□□ -2
TM4SF1P30408 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
TM4SF1P30408 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
TM4SF1P30408 RNU6-522P-201ENST00000364497 107 ntBASIC2.55□□□□□ -2
TM4SF1P30408 Y_RNA.256-201ENST00000364594 104 ntBASIC2.55□□□□□ -2
TM4SF1P30408 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
TM4SF1P30408 RNU6-933P-201ENST00000384424 107 ntBASIC2.55□□□□□ -2
TM4SF1P30408 MIR561-201ENST00000385216 97 ntBASIC2.55□□□□□ -2
TM4SF1P30408 SNORD73A-201ENST00000386062 65 ntBASIC2.55□□□□□ -2
TM4SF1P30408 BTF3L4P2-201ENST00000392798 346 ntBASIC2.55□□□□□ -2
TM4SF1P30408 MIR450B-201ENST00000401182 78 ntBASIC2.55□□□□□ -2
TM4SF1P30408 MIR1277-201ENST00000408536 78 ntBASIC2.55□□□□□ -2
TM4SF1P30408 HMGN2P35-201ENST00000412164 270 ntBASIC2.55□□□□□ -2
TM4SF1P30408 UBE2V1P4-201ENST00000425374 344 ntBASIC2.55□□□□□ -2
TM4SF1P30408 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC2.55□□□□□ -2
TM4SF1P30408 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.55□□□□□ -2
TM4SF1P30408 AC022447.4-201ENST00000504053 364 ntBASIC2.55□□□□□ -2
TM4SF1P30408 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.55□□□□□ -2
TM4SF1P30408 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.55□□□□□ -2
TM4SF1P30408 RNU6-718P-201ENST00000516166 105 ntBASIC2.55□□□□□ -2
TM4SF1P30408 Y_RNA.665-201ENST00000516177 98 ntBASIC2.55□□□□□ -2
TM4SF1P30408 MTCO3P13-201ENST00000577757 781 ntBASIC2.55□□□□□ -2
TM4SF1P30408 MIR3136-201ENST00000583498 78 ntBASIC2.55□□□□□ -2
TM4SF1P30408 MIR4781-201ENST00000585250 76 ntBASIC2.55□□□□□ -2
TM4SF1P30408 BNIP3P25-201ENST00000596023 559 ntBASIC2.55□□□□□ -2
TM4SF1P30408 AL627309.6-201ENST00000606857 840 ntBASIC2.55□□□□□ -2
TM4SF1P30408 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
TM4SF1P30408 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.55□□□□□ -2
TM4SF1P30408 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.55□□□□□ -2
TM4SF1P30408 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.54□□□□□ -2
TM4SF1P30408 RNU1-72P-201ENST00000362976 153 ntBASIC2.54□□□□□ -2
TM4SF1P30408 Y_RNA.157-201ENST00000363638 102 ntBASIC2.54□□□□□ -2
TM4SF1P30408 RNU6-534P-201ENST00000364877 106 ntBASIC2.54□□□□□ -2
TM4SF1P30408 MIR548F1-201ENST00000408667 84 ntBASIC2.54□□□□□ -2
TM4SF1P30408 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.54□□□□□ -2
TM4SF1P30408 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
TM4SF1P30408 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
TM4SF1P30408 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.54□□□□□ -2
TM4SF1P30408 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.54□□□□□ -2
TM4SF1P30408 AC016632.1-201ENST00000503994 196 ntBASIC2.54□□□□□ -2
TM4SF1P30408 RN7SKP256-201ENST00000517201 314 ntBASIC2.54□□□□□ -2
TM4SF1P30408 AC007375.1-201ENST00000554513 578 ntBASIC2.54□□□□□ -2
TM4SF1P30408 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.54□□□□□ -2
TM4SF1P30408 AL159153.1-201ENST00000619688 317 ntBASIC2.54□□□□□ -2
TM4SF1P30408 MIR7111-201ENST00000619751 72 ntBASIC2.54□□□□□ -2
TM4SF1P30408 AC024614.3-201ENST00000637860 256 ntBASIC2.54□□□□□ -2
TM4SF1P30408 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
TM4SF1P30408 AC092268.1-201ENST00000342691 405 ntBASIC2.53□□□□□ -2
TM4SF1P30408 RNU6-1329P-201ENST00000365664 107 ntBASIC2.53□□□□□ -2
TM4SF1P30408 RNU6-43P-201ENST00000384302 107 ntBASIC2.53□□□□□ -2
TM4SF1P30408 RNU6-692P-201ENST00000384496 107 ntBASIC2.53□□□□□ -2
TM4SF1P30408 MIR95-201ENST00000385072 81 ntBASIC2.53□□□□□ -2
TM4SF1P30408 C8orf59P1-201ENST00000429930 303 ntBASIC2.53□□□□□ -2
TM4SF1P30408 SNAP23P1-201ENST00000433229 246 ntBASIC2.53□□□□□ -2
TM4SF1P30408 AC244670.1-201ENST00000436879 112 ntBASIC2.53□□□□□ -2
TM4SF1P30408 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.53□□□□□ -2
TM4SF1P30408 AL139109.1-201ENST00000455491 297 ntBASIC2.53□□□□□ -2
TM4SF1P30408 AC092989.1-201ENST00000481235 277 ntBASIC2.53□□□□□ -2
TM4SF1P30408 RNU6-1332P-201ENST00000516666 104 ntBASIC2.53□□□□□ -2
TM4SF1P30408 AC104576.1-201ENST00000524225 88 ntBASIC2.53□□□□□ -2
TM4SF1P30408 AP005597.4-201ENST00000526762 229 ntBASIC2.53□□□□□ -2
TM4SF1P30408 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.53□□□□□ -2
TM4SF1P30408 HSPE1P4-201ENST00000550617 308 ntBASIC2.53□□□□□ -2
TM4SF1P30408 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.53□□□□□ -2
TM4SF1P30408 AC093913.1-201ENST00000614178 329 ntBASIC2.53□□□□□ -2
TM4SF1P30408 MIR3662-201ENST00000637030 95 ntBASIC2.53□□□□□ -2
TM4SF1P30408 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TM4SF1P30408 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
TM4SF1P30408 Y_RNA.40-201ENST00000362645 93 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 DEFA7P-201ENST00000382676 285 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 Y_RNA.505-201ENST00000384489 102 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 RNU6-332P-201ENST00000391193 108 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC2.52□□□□□ -2.01
TM4SF1P30408 Y_RNA.615-201ENST00000410769 117 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.52□□□□□ -2.01
TM4SF1P30408 AIMP1P2-201ENST00000425294 312 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 AC078809.1-201ENST00000427601 140 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.52□□□□□ -2.01
TM4SF1P30408 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.52□□□□□ -2.01
TM4SF1P30408 AC098799.2-201ENST00000509466 868 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.52□□□□□ -2.01
TM4SF1P30408 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.52□□□□□ -2.01
TM4SF1P30408 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
TM4SF1P30408 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.52□□□□□ -2.01
TM4SF1P30408 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.52□□□□□ -2.01
TM4SF1P30408 CBX3P7-201ENST00000532876 502 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 AC026371.1-201ENST00000551867 419 ntBASIC2.52□□□□□ -2.01
TM4SF1P30408 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 157.7 ms