Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SNORA25.12-201ENST00000516202 82 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 RNU7-143P-201ENST00000516781 65 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 RNU6-971P-201ENST00000516920 106 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.18□□□□□ -1.74
NFKB1P19838 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC4.18□□□□□ -1.74
NFKB1P19838 CYP4A27P-201ENST00000567218 190 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 MIR4744-201ENST00000581563 82 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 MIR4697-201ENST00000582977 78 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 DNAJC19P2-201ENST00000593340 302 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 AL359881.1-201ENST00000602916 267 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NFKB1P19838 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.18□□□□□ -1.74
NFKB1P19838 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NFKB1P19838 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
NFKB1P19838 AC016588.2-201ENST00000632484 3021 ntBASIC4.18□□□□□ -1.74
NFKB1P19838 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
NFKB1P19838 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
NFKB1P19838 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.18□□□□□ -1.74
NFKB1P19838 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NFKB1P19838 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.17□□□□□ -1.74
NFKB1P19838 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NFKB1P19838 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
NFKB1P19838 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NFKB1P19838 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
NFKB1P19838 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
NFKB1P19838 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
NFKB1P19838 RNU6-899P-201ENST00000363947 107 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 RNU1-64P-201ENST00000365443 163 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
NFKB1P19838 RNU6-1264P-201ENST00000383891 107 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 RNU6-44P-201ENST00000384045 107 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 SNORA18.3-201ENST00000384122 132 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 MIR320B2-201ENST00000408479 138 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 AC074290.1-201ENST00000448883 135 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 AL645939.1-201ENST00000453429 797 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 AC078817.1-201ENST00000492623 435 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 RPL29P14-201ENST00000495837 428 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 AC107027.2-201ENST00000512197 115 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 Vault.1-201ENST00000516474 102 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 RNU6-919P-201ENST00000516731 104 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 CYCSP29-201ENST00000533731 318 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 AC069294.1-201ENST00000608397 350 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 AC005520.5-201ENST00000613926 164 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 MIR7151-201ENST00000617477 60 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.17□□□□□ -1.74
NFKB1P19838 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
NFKB1P19838 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.17□□□□□ -1.74
NFKB1P19838 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
NFKB1P19838 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.17□□□□□ -1.74
NFKB1P19838 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NFKB1P19838 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
NFKB1P19838 Y_RNA.71-201ENST00000362892 104 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 SNORD35B-201ENST00000363660 87 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 RNU6-801P-201ENST00000364087 105 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 MIR607-201ENST00000385241 96 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 U3.26-201ENST00000391236 204 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 PTMAP5-201ENST00000393073 333 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.16□□□□□ -1.74
NFKB1P19838 MIR513C-201ENST00000401352 84 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 RPS29P20-201ENST00000489592 171 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.16□□□□□ -1.74
NFKB1P19838 AP003730.1-201ENST00000524605 285 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 AC021269.2-201ENST00000532318 330 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.16□□□□□ -1.74
NFKB1P19838 AC022616.8-201ENST00000533569 253 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 MIR5684-201ENST00000585074 65 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 SNRPGP20-201ENST00000604477 205 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 AC013791.1-201ENST00000616619 62 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 AL445567.2-201ENST00000618935 498 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 MIR8059-201ENST00000620427 81 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 AC007656.2-201ENST00000624902 4547 ntBASIC4.16□□□□□ -1.74
NFKB1P19838 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
NFKB1P19838 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
NFKB1P19838 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.16□□□□□ -1.74
NFKB1P19838 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NFKB1P19838 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
NFKB1P19838 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.15□□□□□ -1.74
NFKB1P19838 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.15□□□□□ -1.74
NFKB1P19838 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NFKB1P19838 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NFKB1P19838 AC002543.1-201ENST00000299783 1954 ntBASIC4.15□□□□□ -1.74
NFKB1P19838 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
NFKB1P19838 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.15□□□□□ -1.75
NFKB1P19838 RNU6-324P-201ENST00000363957 106 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RNU6-454P-201ENST00000364292 107 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RNU6-376P-201ENST00000384731 106 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RPL21P17-201ENST00000397467 475 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 MIR208B-201ENST00000401172 77 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AC004552.1-201ENST00000419089 348 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AC099548.1-201ENST00000421443 426 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AL135790.2-201ENST00000437701 267 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RPS26P3-201ENST00000470205 348 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
NFKB1P19838 AC090543.2-201ENST00000483963 348 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AC004057.1-201ENST00000485827 348 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RN7SL604P-201ENST00000492589 296 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 ACA59.2-201ENST00000517061 156 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AC136628.3-201ENST00000521868 290 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 AC021739.1-201ENST00000559631 174 ntBASIC4.15□□□□□ -1.75
NFKB1P19838 RN7SL600P-201ENST00000581811 299 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 180.9 ms