Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 HMGN1P28-201ENST00000521340 364 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 TRAV32-201ENST00000553993 340 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC012433.1-201ENST00000588916 398 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC004805.2-201ENST00000605382 482 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 AC141273.2-201ENST00000618989 130 ntBASIC2.99□□□□□ -1.93
SNHG28P0DPA3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
SNHG28P0DPA3 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 FTLP6-201ENST00000355274 422 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RNU6-1249P-201ENST00000363237 111 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RNU6-596P-201ENST00000365395 98 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.533-201ENST00000384596 114 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.577-201ENST00000384794 101 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 MIR607-201ENST00000385241 96 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RNU6-1093P-201ENST00000391194 107 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 BMS1P22-201ENST00000414726 313 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC079780.1-201ENST00000428259 207 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 HIGD1AP2-201ENST00000446367 280 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 FCF1P4-201ENST00000448326 183 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 PCMTD1P1-201ENST00000455560 355 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RPL21P104-201ENST00000464143 478 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC011005.2-201ENST00000487324 359 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RNU6-1023P-201ENST00000516137 106 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RNA5SP320-201ENST00000516263 124 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 SNORA40.14-201ENST00000516543 86 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RNA5SP471-201ENST00000516971 106 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RNU6-570P-201ENST00000517051 105 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 RN7SKP234-201ENST00000517173 224 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC109329.1-201ENST00000518744 317 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC109329.2-201ENST00000519658 482 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 HSPE1P20-201ENST00000538133 289 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 TRAV37-201ENST00000553906 342 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC006600.1-201ENST00000572529 153 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 MIR4474-201ENST00000579189 78 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 CPDP1-201ENST00000579660 283 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 LRRC37A5P-203ENST00000580181 585 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC005899.2-201ENST00000584353 90 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AC006023.2-201ENST00000609916 167 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.98□□□□□ -1.93
SNHG28P0DPA3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 AL359693.1-201ENST00000614959 2407 ntBASIC2.98□□□□□ -1.93
SNHG28P0DPA3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AL157777.2-201ENST00000258070 137 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 RNU4-82P-201ENST00000362443 140 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.19-201ENST00000362462 99 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 RNY1P16-201ENST00000363063 111 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 SNORA36C-201ENST00000384289 132 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 MIR215-201ENST00000384858 110 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AL445529.1-201ENST00000398713 389 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AL590135.1-201ENST00000422215 156 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 RPL26P6-201ENST00000440913 438 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 LINC01399-202ENST00000458450 244 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 RNU6-138P-201ENST00000515952 107 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 HMGB1P14-201ENST00000557424 591 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AL121917.1-203ENST00000605534 577 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 HMGN2P28-201ENST00000606102 262 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 SDR42E1P2-201ENST00000614861 481 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AP000560.1-201ENST00000624150 1937 ntBASIC2.97□□□□□ -1.93
SNHG28P0DPA3 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
SNHG28P0DPA3 AL136164.4-201ENST00000625013 2135 ntBASIC2.96□□□□□ -1.93
SNHG28P0DPA3 Y_RNA.276-201ENST00000364732 109 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 MIR1302-6-201ENST00000408466 90 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 RNU2-43P-201ENST00000410306 190 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 RNU6-293P-201ENST00000411259 106 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 EI24P1-201ENST00000416584 867 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
SNHG28P0DPA3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.96□□□□□ -1.94
SNHG28P0DPA3 AL513328.1-201ENST00000446460 224 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.96□□□□□ -1.94
SNHG28P0DPA3 RNA5SP76-201ENST00000516277 87 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 RNU4-60P-201ENST00000517239 135 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 SYF2P1-201ENST00000550658 413 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 AC027176.1-201ENST00000560204 514 ntBASIC2.96□□□□□ -1.94
SNHG28P0DPA3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.96□□□□□ -1.94
SNHG28P0DPA3 MIR5701-3-201ENST00000578890 82 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms