Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SNORA29-201ENST00000384183 140 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 RNU1-57P-201ENST00000384491 166 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AL512633.1-201ENST00000399931 655 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 RNA5SP494-201ENST00000410653 129 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC097463.2-201ENST00000421074 142 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC3.11□□□□□ -1.91
NKX6-1P78426 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX6-1P78426 snoU13.30-201ENST00000458951 104 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 RPL27AP5-201ENST00000469428 449 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX6-1P78426 AIG1P1-201ENST00000503376 148 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.11□□□□□ -1.91
NKX6-1P78426 SNORA25.10-201ENST00000515926 124 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 RNA5SP112-201ENST00000515937 99 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 RNU6-567P-201ENST00000516746 107 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 Y_RNA.706-201ENST00000516933 99 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC144568.1-201ENST00000520139 137 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.11□□□□□ -1.91
NKX6-1P78426 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NKX6-1P78426 AC079598.5-201ENST00000547460 117 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC104581.2-201ENST00000572227 430 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 MIR3136-201ENST00000583498 78 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC006504.6-201ENST00000590142 199 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC016925.2-201ENST00000605108 242 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AC100812.1-201ENST00000607622 580 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 AL159153.1-201ENST00000619688 317 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 SCARNA4-201ENST00000629045 128 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX6-1P78426 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.11□□□□□ -1.91
NKX6-1P78426 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NKX6-1P78426 AL079305.1-201ENST00000623159 3008 ntBASIC3.11□□□□□ -1.91
NKX6-1P78426 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.1□□□□□ -1.91
NKX6-1P78426 Y_RNA.500-201ENST00000384466 111 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 SNORA12.2-201ENST00000391040 156 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AL590135.1-201ENST00000422215 156 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC019205.3-201ENST00000424573 156 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC005326.1-201ENST00000429197 123 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC016700.2-201ENST00000446011 156 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.1□□□□□ -1.91
NKX6-1P78426 AL118496.2-201ENST00000448300 230 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC015911.1-201ENST00000495111 156 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC105758.1-201ENST00000506038 399 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 SCARNA17.1-201ENST00000516211 143 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 SNORA31.6-201ENST00000516241 130 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 SCARNA17.2-201ENST00000516334 143 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 RNU6-579P-201ENST00000516879 102 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.1□□□□□ -1.91
NKX6-1P78426 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX6-1P78426 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NKX6-1P78426 MIR5571-201ENST00000577998 113 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC006557.5-201ENST00000603126 811 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AC006077.1-201ENST00000604746 343 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 AL137843.1-201ENST00000605078 385 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 SCARNA17.4-201ENST00000614296 143 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 MIR8057-201ENST00000620957 69 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 SNORA43.4-201ENST00000629559 138 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX6-1P78426 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX6-1P78426 Z75746.1-201ENST00000440243 2080 ntBASIC3.1□□□□□ -1.91
NKX6-1P78426 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.1□□□□□ -1.91
NKX6-1P78426 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NKX6-1P78426 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.09□□□□□ -1.91
NKX6-1P78426 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.09□□□□□ -1.91
NKX6-1P78426 AC058791.1-201ENST00000608412 3198 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 Y_RNA.39-201ENST00000362620 98 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 RNU6-529P-201ENST00000363383 104 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 Y_RNA.132-201ENST00000363421 102 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 SNORA33.2-201ENST00000365413 134 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 Y_RNA.405-201ENST00000383979 100 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 Y_RNA.451-201ENST00000384200 100 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 Y_RNA.524-201ENST00000384564 100 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 Y_RNA.561-201ENST00000384694 100 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 MCFD2P1-201ENST00000417812 300 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AL358453.1-201ENST00000422522 250 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 MRPS18CP6-201ENST00000423587 223 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX6-1P78426 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX6-1P78426 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX6-1P78426 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX6-1P78426 AC009296.1-201ENST00000443146 155 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 MTND4P19-201ENST00000446659 478 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.09□□□□□ -1.91
NKX6-1P78426 snoU13.14-201ENST00000459372 104 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AC008155.2-201ENST00000464337 397 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AC087477.1-201ENST00000465747 340 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 RPL30P1-201ENST00000488676 339 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 RNU2-27P-201ENST00000516185 142 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 SCARNA15.1-201ENST00000516384 125 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 RN7SKP272-201ENST00000516988 232 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AC091144.1-201ENST00000519573 138 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AC092447.9-201ENST00000603395 144 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 RPL23AP88-201ENST00000605759 454 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 AC091925.1-201ENST00000623204 462 ntBASIC3.09□□□□□ -1.91
NKX6-1P78426 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
NKX6-1P78426 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
NKX6-1P78426 RNU6-655P-201ENST00000362858 107 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 RNU6-486P-201ENST00000363116 107 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 Y_RNA.216-201ENST00000364205 93 ntBASIC3.08□□□□□ -1.92
NKX6-1P78426 Y_RNA.364-201ENST00000365532 101 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms