Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC074117.2-201ENST00000417130 397 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 RNU7-180P-201ENST00000459240 63 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AC090515.1-201ENST00000465295 476 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 CKS1BP2-201ENST00000497342 240 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 SNORA40.12-201ENST00000516329 111 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 SNORA31.23-201ENST00000517219 133 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 MTND4P7-201ENST00000523876 130 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AP001893.2-201ENST00000526949 202 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AC104383.1-201ENST00000530297 370 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AC087241.2-201ENST00000535801 324 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AL138976.2-201ENST00000563989 694 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AC090897.2-201ENST00000581715 130 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 MIR3941-201ENST00000582572 103 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 AP001330.5-201ENST00000607176 411 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 uc_338.15-201ENST00000615470 191 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 Z69720.2-201ENST00000624755 279 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 ZNF658B-202ENST00000615961 3375 ntBASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
ATG4BQ9Y4P1 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AC002543.1-201ENST00000299783 1954 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 Y_RNA.41-201ENST00000362646 102 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-623P-201ENST00000363143 105 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-266P-201ENST00000364225 107 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-1322P-201ENST00000364309 107 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 RNU1-148P-201ENST00000384472 162 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 RN7SKP158-201ENST00000410453 326 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 RNU2-23P-201ENST00000410545 195 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AF274854.1-201ENST00000413236 615 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AL121601.2-201ENST00000438019 707 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 IFNA11P-201ENST00000446352 526 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 MTCYBP40-201ENST00000509390 1135 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 RNA5SP401-201ENST00000515920 127 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AC118273.2-201ENST00000532092 465 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AP000889.2-201ENST00000532684 490 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AC025165.5-201ENST00000602802 578 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AL355297.2-201ENST00000604792 129 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AC123912.5-201ENST00000605470 343 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 Z82243.1-201ENST00000609432 473 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 AL359880.1-201ENST00000621879 266 ntBASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ATG4BQ9Y4P1 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 SNORA69-201ENST00000383895 132 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 Y_RNA.480-201ENST00000384364 102 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 MIR186-201ENST00000384988 86 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 MIR561-201ENST00000385216 97 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-780P-201ENST00000391030 104 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AL135786.1-201ENST00000415892 214 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 Z98742.3-201ENST00000418637 326 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 VN1R108P-201ENST00000431580 830 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AL591043.1-201ENST00000432461 424 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 MTND1P1-201ENST00000445453 368 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 PSPHP1-201ENST00000450062 261 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AC083798.1-201ENST00000472671 131 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 RPL30P12-201ENST00000474666 353 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 ANXA2P1-201ENST00000505539 926 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AC009646.1-201ENST00000510455 318 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 RNU6-1038P-201ENST00000516516 104 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 CBX3P7-201ENST00000532876 502 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 CYCSP26-201ENST00000534107 320 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AC012557.2-201ENST00000605919 418 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 SNORD14A-201ENST00000606526 91 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 HULC.1-201ENST00000612720 240 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AC015540.1-201ENST00000615828 501 ntBASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATG4BQ9Y4P1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 218.6 ms