Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.27□□□□□ -1.73
NFKB1P19838 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
NFKB1P19838 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NFKB1P19838 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 RN7SKP280-201ENST00000364196 304 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 U3.15-201ENST00000365398 212 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 RNU6-245P-201ENST00000384020 107 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 RNU6-1310P-201ENST00000384153 107 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 RNU6-239P-201ENST00000390990 99 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AL512633.1-201ENST00000399931 655 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 MIR888-201ENST00000401186 77 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC009220.1-201ENST00000451614 275 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC007215.1-201ENST00000464893 276 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC006463.2-201ENST00000473326 348 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC091179.3-201ENST00000474761 144 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.27□□□□□ -1.73
NFKB1P19838 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 RNA5SP272-201ENST00000516095 111 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC100767.1-201ENST00000528178 123 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.27□□□□□ -1.73
NFKB1P19838 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
NFKB1P19838 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AC011944.2-201ENST00000624440 683 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.27□□□□□ -1.73
NFKB1P19838 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.27□□□□□ -1.73
NFKB1P19838 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NFKB1P19838 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
NFKB1P19838 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NFKB1P19838 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NFKB1P19838 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
NFKB1P19838 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
NFKB1P19838 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.27□□□□□ -1.73
NFKB1P19838 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
NFKB1P19838 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
NFKB1P19838 MIR448-201ENST00000362131 111 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 RNU6-884P-201ENST00000363889 107 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 RNU1-32P-201ENST00000363937 159 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 Y_RNA.273-201ENST00000364703 102 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 RNU6-215P-201ENST00000365169 102 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 AL160275.2-201ENST00000412010 394 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 NDUFS5P4-201ENST00000412983 318 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.26□□□□□ -1.73
NFKB1P19838 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.26□□□□□ -1.73
NFKB1P19838 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.26□□□□□ -1.73
NFKB1P19838 HMGB1P37-201ENST00000439613 609 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC4.26□□□□□ -1.73
NFKB1P19838 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.26□□□□□ -1.73
NFKB1P19838 Y_RNA.637-201ENST00000459424 114 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 RN7SL303P-201ENST00000469773 251 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 PARP4P3-201ENST00000510265 317 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.26□□□□□ -1.73
NFKB1P19838 RNA5SP154-201ENST00000516193 111 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.26□□□□□ -1.73
NFKB1P19838 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.26□□□□□ -1.73
NFKB1P19838 AC009127.3-201ENST00000570531 403 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 AC009163.5-201ENST00000575421 637 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 MIR7702-201ENST00000621931 59 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.26□□□□□ -1.73
NFKB1P19838 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
NFKB1P19838 AC010332.2-201ENST00000613083 1904 ntBASIC4.26□□□□□ -1.73
NFKB1P19838 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
NFKB1P19838 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.26□□□□□ -1.73
NFKB1P19838 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.26□□□□□ -1.73
NFKB1P19838 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.26□□□□□ -1.73
NFKB1P19838 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
NFKB1P19838 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.25□□□□□ -1.73
NFKB1P19838 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.25□□□□□ -1.73
NFKB1P19838 Z82217.1-201ENST00000625157 8149 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.25□□□□□ -1.73
NFKB1P19838 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 AC126755.2-208ENST00000327792 462 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AC138969.1-213ENST00000331436 462 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RNA5SP388-201ENST00000362584 119 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RNA5SP502-201ENST00000362694 119 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RNU6-799P-201ENST00000363567 107 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RNA5SP515-201ENST00000364570 118 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 Y_RNA.353-201ENST00000365440 108 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
NFKB1P19838 MIR141-201ENST00000384975 95 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 MIR513A2-201ENST00000385249 127 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RNU6-381P-201ENST00000391259 108 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 PPIAP31-201ENST00000405422 495 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.25□□□□□ -1.73
NFKB1P19838 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.25□□□□□ -1.73
NFKB1P19838 AC009963.1-201ENST00000417265 157 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 CR769767.1-201ENST00000436337 346 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RPL23AP46-201ENST00000438548 490 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.25□□□□□ -1.73
NFKB1P19838 NDUFS5P3-201ENST00000450668 321 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 ADAM3A-203ENST00000461344 2157 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 RN7SL585P-201ENST00000470538 280 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AC109327.1-201ENST00000471666 403 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AC006517.1-201ENST00000480485 328 ntBASIC4.25□□□□□ -1.73
NFKB1P19838 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms