Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MIR3199-2-201ENST00000636243 86 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 TPTEP1-208ENST00000636884 213 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 MTND4P14-201ENST00000435799 1354 ntBASIC2.86□□□□□ -1.95
DDX43Q9NXZ2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC103710.2-202ENST00000641454 2853 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RNU6-179P-201ENST00000363350 107 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 SET-203ENST00000372688 801 ntTSL 2 BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.394-201ENST00000383942 103 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RNU6-510P-201ENST00000391239 108 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RPL21P75-201ENST00000396599 483 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RPL21P28-201ENST00000401418 483 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AL592114.1-201ENST00000403842 483 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RNA5SP492-201ENST00000411330 114 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AL353729.1-201ENST00000425044 720 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC007677.1-201ENST00000445757 515 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 MTATP6P7-201ENST00000453315 681 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AP000705.1-201ENST00000454567 350 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC233279.1-201ENST00000455300 423 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RPL21P39-201ENST00000463605 483 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC107626.1-201ENST00000471084 183 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RPL21P93-201ENST00000480465 489 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC087190.1-201ENST00000484462 480 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC093591.1-201ENST00000491435 481 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RPL21P16-201ENST00000495531 483 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.675-201ENST00000516389 149 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RNU6-143P-201ENST00000516942 93 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RNU6-685P-201ENST00000517088 95 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RN7SKP40-201ENST00000517211 242 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AL355375.2-201ENST00000574825 175 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AC008521.1-201ENST00000587471 187 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 BNIP3P25-201ENST00000596023 559 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AL365204.3-201ENST00000612448 685 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 AL133216.2-202ENST00000634512 349 ntBASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
DDX43Q9NXZ2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AL136360.1-201ENST00000503377 1900 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AC010889.1-201ENST00000566193 2666 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AC004944.1-201ENST00000517807 3059 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.58-201ENST00000362807 102 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.154-201ENST00000363624 102 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 RNU6-288P-201ENST00000363690 104 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 RNY3P1-201ENST00000365085 102 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 RNU4-66P-201ENST00000365199 138 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 RNY3-201ENST00000365484 102 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 RNU6-946P-201ENST00000383878 107 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 SNORA32.2-201ENST00000384049 122 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 Y_RNA.490-201ENST00000384413 102 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 RPS12P24-201ENST00000412619 387 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AL592045.1-201ENST00000429867 352 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AC092427.1-202ENST00000430569 476 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AL365400.1-201ENST00000431854 640 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AC007547.1-201ENST00000462177 490 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AC096725.1-201ENST00000514266 313 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 RNU6-703P-201ENST00000516946 107 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 SCARNA11.3-201ENST00000517276 130 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 HSPE1P20-201ENST00000538133 289 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 CTHRC1P1-201ENST00000605383 469 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 uc_338.5-201ENST00000611839 155 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 uc_338.11-201ENST00000619132 160 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 MTND5P42-201ENST00000637720 498 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 MIR7515-201ENST00000637837 67 ntBASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
DDX43Q9NXZ2 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
DDX43Q9NXZ2 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.84□□□□□ -1.96
DDX43Q9NXZ2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.100-201ENST00000363141 102 ntBASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.301-201ENST00000364990 103 ntBASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 Y_RNA.378-201ENST00000365652 113 ntBASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
DDX43Q9NXZ2 RNU6-658P-201ENST00000384606 106 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms