Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-596P-201ENST00000365395 98 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AL357075.1-201ENST00000404107 726 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AC114482.1-201ENST00000418010 247 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.73□□□□□ -1.81
KRT40Q6A162 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.73□□□□□ -1.81
KRT40Q6A162 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.73□□□□□ -1.81
KRT40Q6A162 snoU13.4-201ENST00000458916 104 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AC008571.1-201ENST00000467232 300 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AC097462.2-201ENST00000504623 481 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AC105758.1-201ENST00000506038 399 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 RNU6-143P-201ENST00000516942 93 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 HIGD1AP1-201ENST00000550979 275 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 MIR2682-201ENST00000580305 110 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 AC005899.2-201ENST00000584353 90 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.73□□□□□ -1.81
KRT40Q6A162 MIR6715A-201ENST00000615929 79 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 Z69720.2-201ENST00000624755 279 ntBASIC3.73□□□□□ -1.81
KRT40Q6A162 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
KRT40Q6A162 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
KRT40Q6A162 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.73□□□□□ -1.81
KRT40Q6A162 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.73□□□□□ -1.81
KRT40Q6A162 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
KRT40Q6A162 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT40Q6A162 RNU6-450P-201ENST00000364654 107 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 SET-203ENST00000372688 801 ntTSL 2 BASIC3.72□□□□□ -1.81
KRT40Q6A162 RNU2-33P-201ENST00000410344 192 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRT40Q6A162 EI24P1-201ENST00000416584 867 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 RPS15AP6-201ENST00000420703 385 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AC096644.2-201ENST00000429278 159 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 DAP3P1-201ENST00000441522 278 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT40Q6A162 CECR9-201ENST00000453421 199 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AL353752.1-201ENST00000454946 260 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 RPL23AP14-201ENST00000468281 468 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 RPL27AP5-201ENST00000469428 449 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AL049830.2-201ENST00000480072 201 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AC068781.1-201ENST00000488231 618 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AL160314.1-201ENST00000490836 438 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AC006445.1-201ENST00000491925 405 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AC139453.3-201ENST00000493276 369 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AL359273.1-201ENST00000510918 627 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 SNORA31.8-201ENST00000516327 108 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 CBX3P8-201ENST00000532412 525 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT40Q6A162 GNAI2P1-201ENST00000541815 315 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AC073657.2-201ENST00000605661 303 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 MIR3976-201ENST00000606807 139 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AL591516.1-201ENST00000611326 274 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AC091903.1-201ENST00000624322 454 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.72□□□□□ -1.81
KRT40Q6A162 AL137790.1-201ENST00000634283 177 ntBASIC3.72□□□□□ -1.81
KRT40Q6A162 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.72□□□□□ -1.81
KRT40Q6A162 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
KRT40Q6A162 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
KRT40Q6A162 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT40Q6A162 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT40Q6A162 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT40Q6A162 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
KRT40Q6A162 AF127577.6-201ENST00000623352 2191 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 MIR412-201ENST00000362142 91 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-37P-201ENST00000362692 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-11P-201ENST00000364234 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 Y_RNA.245-201ENST00000364493 95 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-7-201ENST00000364784 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-8-201ENST00000365467 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-25P-201ENST00000383873 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-1-201ENST00000383898 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-48P-201ENST00000384161 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-36P-201ENST00000384172 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-4P-201ENST00000384205 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-5P-201ENST00000384238 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-3P-201ENST00000384314 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-16P-201ENST00000384385 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-15P-201ENST00000384534 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-2-201ENST00000384627 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-29P-201ENST00000384637 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-9-201ENST00000384776 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-33P-201ENST00000384793 107 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AL096701.2-201ENST00000416920 238 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AC245291.1-201ENST00000419501 328 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.71□□□□□ -1.82
KRT40Q6A162 AC093151.1-201ENST00000427711 313 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AC007919.1-201ENST00000429380 217 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AL353997.1-201ENST00000432936 108 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RPL23AP50-201ENST00000434149 455 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AC006028.1-201ENST00000438379 402 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AL731563.1-201ENST00000442202 214 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AL583843.1-201ENST00000456070 346 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AC112492.4-201ENST00000456549 352 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 HMGN2P13-201ENST00000476476 274 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AC010655.3-201ENST00000478818 450 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 KC877373.1-201ENST00000479066 408 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 FO393415.2-201ENST00000480085 343 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AC078817.1-201ENST00000492623 435 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 AC015911.1-201ENST00000495111 156 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 RNU6-307P-201ENST00000516743 106 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
KRT40Q6A162 AC025755.1-201ENST00000521306 278 ntBASIC3.71□□□□□ -1.82
KRT40Q6A162 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms