Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-699P-201ENST00000517081 110 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.86□□□□□ -1.79
KRT40Q6A162 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.86□□□□□ -1.79
KRT40Q6A162 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.86□□□□□ -1.79
KRT40Q6A162 SNRPGP15-201ENST00000600149 222 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 SDAD1P2-201ENST00000441308 2028 ntBASIC3.86□□□□□ -1.79
KRT40Q6A162 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.86□□□□□ -1.79
KRT40Q6A162 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRT40Q6A162 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
KRT40Q6A162 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
KRT40Q6A162 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
KRT40Q6A162 RNU1-70P-201ENST00000362618 164 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 SNORA80A-201ENST00000363922 136 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 RNU6-1329P-201ENST00000365664 107 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRT40Q6A162 RNU6-214P-201ENST00000384130 107 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 RNU6-301P-201ENST00000384277 107 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 MIR124-3-201ENST00000384866 87 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.85□□□□□ -1.79
KRT40Q6A162 AL353621.1-201ENST00000418219 243 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 UBE2D3P2-201ENST00000424409 445 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.85□□□□□ -1.79
KRT40Q6A162 GSTA11P-201ENST00000452866 669 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.85□□□□□ -1.79
KRT40Q6A162 AC092451.1-201ENST00000480211 153 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 RNU6-470P-201ENST00000515954 104 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 AC009902.1-201ENST00000519351 183 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.85□□□□□ -1.79
KRT40Q6A162 AC104576.1-201ENST00000524225 88 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.85□□□□□ -1.79
KRT40Q6A162 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC3.85□□□□□ -1.79
KRT40Q6A162 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.85□□□□□ -1.79
KRT40Q6A162 MIR5692A1-201ENST00000580523 69 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 BNIP3P16-201ENST00000589779 534 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 NUTF2P8-201ENST00000604593 363 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 AL132822.1-201ENST00000617063 513 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 AL078596.1-201ENST00000624856 447 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.85□□□□□ -1.79
KRT40Q6A162 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
KRT40Q6A162 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.85□□□□□ -1.79
KRT40Q6A162 AC007496.3-201ENST00000624987 3443 ntBASIC3.85□□□□□ -1.79
KRT40Q6A162 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRT40Q6A162 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KRT40Q6A162 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRT40Q6A162 Y_RNA.151-201ENST00000363566 112 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 SNORD6-201ENST00000365444 73 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 Z85995.1-201ENST00000415547 335 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 UBE2V1P4-201ENST00000425374 344 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 USMG5P1-201ENST00000425964 177 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL645568.3-201ENST00000433683 316 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT40Q6A162 SNRPEP4-201ENST00000435815 279 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT40Q6A162 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.84□□□□□ -1.79
KRT40Q6A162 RPL12P25-201ENST00000455592 494 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 MTATP8P1-201ENST00000467115 207 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 RPL31P60-201ENST00000478450 367 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 RPL21P13-201ENST00000488305 481 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AC023141.12-201ENST00000512399 199 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.84□□□□□ -1.79
KRT40Q6A162 AP003122.3-201ENST00000526316 255 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 COX6CP5-201ENST00000527162 228 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.84□□□□□ -1.79
KRT40Q6A162 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.84□□□□□ -1.79
KRT40Q6A162 MED28P6-201ENST00000558776 231 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.84□□□□□ -1.79
KRT40Q6A162 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
KRT40Q6A162 AL161798.1-201ENST00000604630 131 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL033523.1-201ENST00000605153 153 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AC123912.5-201ENST00000605470 343 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 RNU6-85P-201ENST00000605989 107 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL162274.2-201ENST00000614406 332 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL360181.4-201ENST00000621752 134 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AC138627.2-201ENST00000624202 601 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL512643.1-201ENST00000635735 524 ntBASIC3.84□□□□□ -1.79
KRT40Q6A162 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.84□□□□□ -1.79
KRT40Q6A162 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
KRT40Q6A162 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
KRT40Q6A162 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
KRT40Q6A162 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRT40Q6A162 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRT40Q6A162 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
KRT40Q6A162 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRT40Q6A162 RNU6-1167P-201ENST00000363227 94 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 AC117470.1-201ENST00000381974 330 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 Y_RNA.527-201ENST00000384573 102 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 RN7SKP284-201ENST00000411002 343 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.83□□□□□ -1.8
KRT40Q6A162 AC008267.5-201ENST00000424928 265 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 AC025750.2-201ENST00000442609 450 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 HMGN2P21-201ENST00000447764 270 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 RPS24P6-201ENST00000452670 400 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 HMGN2P7-201ENST00000456186 273 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 S100A11P2-201ENST00000467589 312 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.83□□□□□ -1.8
KRT40Q6A162 Y_RNA.661-201ENST00000516003 99 ntBASIC3.83□□□□□ -1.8
KRT40Q6A162 RNU6-1231P-201ENST00000517185 103 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 245.2 ms