Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXD4Q12950 ACA59.2-201ENST00000517061 156 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 MTND1P5-201ENST00000517906 940 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXD4Q12950 PSMA2P1-201ENST00000526365 646 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
FOXD4Q12950 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AC234778.2-201ENST00000566241 354 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AC012119.1-201ENST00000603184 222 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC087045.1-201ENST00000605856 382 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC096772.1-201ENST00000609146 564 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 MIR7112-201ENST00000616126 65 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXD4Q12950 AC138627.2-201ENST00000624202 601 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 AC005609.4-201ENST00000625071 447 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXD4Q12950 MIR3688-2-201ENST00000636963 87 ntBASIC3.09□□□□□ -1.91
FOXD4Q12950 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.92
FOXD4Q12950 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.92
FOXD4Q12950 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
FOXD4Q12950 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
FOXD4Q12950 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 Z98749.2-208ENST00000381646 500 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 Y_RNA.453-201ENST00000384223 109 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 RNU6-301P-201ENST00000384277 107 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 RNU6-1127P-201ENST00000384580 107 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 SNORD70.1-201ENST00000391007 85 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 AL606923.1-201ENST00000406616 190 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 RNU6-908P-201ENST00000410160 94 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 CYCSP48-201ENST00000417124 323 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXD4Q12950 PGBD4P6-201ENST00000421501 610 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 MTCYBP5-201ENST00000423752 1135 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 AL669831.1-202ENST00000428504 417 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 GTF2IP13-201ENST00000438487 386 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 NFU1P2-201ENST00000448700 469 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 CYP2C59P-201ENST00000457790 269 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 SNRPFP3-201ENST00000457792 225 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 AP000852.1-201ENST00000472460 573 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 RPL36AP48-201ENST00000485521 314 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXD4Q12950 AC105417.1-201ENST00000514691 285 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC3.08□□□□□ -1.92
FOXD4Q12950 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXD4Q12950 MIR548AC-201ENST00000585049 88 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 AC010525.2-201ENST00000590920 195 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 MIR7851-201ENST00000610611 160 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 AC092794.1-201ENST00000612734 582 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 MIR1321-201ENST00000637766 79 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 ZNF271P-202ENST00000465539 1970 ntBASIC3.08□□□□□ -1.92
FOXD4Q12950 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.08□□□□□ -1.92
FOXD4Q12950 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.08□□□□□ -1.92
FOXD4Q12950 RNU1-75P-201ENST00000347264 129 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 Y_RNA.9-201ENST00000362354 101 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RNU4-66P-201ENST00000365199 138 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RNU6-898P-201ENST00000365627 104 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 Y_RNA.402-201ENST00000383972 102 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 SNORA16.2-201ENST00000390991 127 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RNU6-648P-201ENST00000410190 107 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 OR9R1P-201ENST00000412200 877 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AL592148.1-201ENST00000413568 445 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXD4Q12950 AC244505.4-201ENST00000434905 287 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXD4Q12950 CST9LP2-201ENST00000437612 320 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AL121601.2-201ENST00000438019 707 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.07□□□□□ -1.92
FOXD4Q12950 SSXP5-201ENST00000443473 287 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RBMY2UP-201ENST00000453474 324 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RNU7-180P-201ENST00000459240 63 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXD4Q12950 RNU1-86P-201ENST00000516108 154 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RNU6-581P-201ENST00000516214 105 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RNA5SP367-201ENST00000516557 118 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RNU1-107P-201ENST00000516617 154 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.07□□□□□ -1.92
FOXD4Q12950 AC079598.5-201ENST00000547460 117 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 RMST_3.1-201ENST00000611651 109 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AC245884.12-201ENST00000615364 59 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 MIR5739-201ENST00000619803 80 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AC091903.1-201ENST00000624322 454 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.07□□□□□ -1.92
FOXD4Q12950 AC131280.1-202ENST00000624067 4211 ntBASIC3.07□□□□□ -1.92
FOXD4Q12950 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
FOXD4Q12950 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXD4Q12950 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
FOXD4Q12950 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
FOXD4Q12950 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXD4Q12950 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.06□□□□□ -1.92
FOXD4Q12950 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
FOXD4Q12950 RNA5SP374-201ENST00000362939 125 ntBASIC3.06□□□□□ -1.92
FOXD4Q12950 Y_RNA.89-201ENST00000363031 102 ntBASIC3.06□□□□□ -1.92
FOXD4Q12950 Y_RNA.295-201ENST00000364918 102 ntBASIC3.06□□□□□ -1.92
FOXD4Q12950 SNORD17-201ENST00000390930 237 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 163.6 ms