Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 U2.21-201ENST00000637295 81 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 AC118273.1-201ENST00000525324 3006 ntBASIC3.87□□□□□ -1.79
NPHS1O60500 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NPHS1O60500 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.87□□□□□ -1.79
NPHS1O60500 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHS1O60500 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHS1O60500 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPHS1O60500 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPHS1O60500 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPHS1O60500 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
NPHS1O60500 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHS1O60500 RNU6-527P-201ENST00000363425 104 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 RNU6-898P-201ENST00000365627 104 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 MIR518D-201ENST00000385014 87 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 RNU6-1093P-201ENST00000391194 107 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
NPHS1O60500 MIR937-201ENST00000401271 86 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AP000275.1-201ENST00000411943 390 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHS1O60500 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHS1O60500 Z82188.1-201ENST00000436709 154 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 MTND4LP30-201ENST00000454092 297 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 U8.22-201ENST00000459141 133 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 RPS23P1-201ENST00000491662 432 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHS1O60500 AC025465.3-201ENST00000510570 311 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 RNU7-175P-201ENST00000515915 61 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 Y_RNA.673-201ENST00000516306 88 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 RNU6-1282P-201ENST00000516735 96 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 MRPS36P4-201ENST00000534436 298 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHS1O60500 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC3.86□□□□□ -1.79
NPHS1O60500 AL442163.3-201ENST00000554110 156 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.86□□□□□ -1.79
NPHS1O60500 RPL23AP78-201ENST00000599928 470 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AC141273.2-201ENST00000618989 130 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 SDR42E1P4-201ENST00000620894 481 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AP000346.3-201ENST00000622821 210 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 AC048347.1-201ENST00000624621 427 ntBASIC3.86□□□□□ -1.79
NPHS1O60500 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.86□□□□□ -1.79
NPHS1O60500 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
NPHS1O60500 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
NPHS1O60500 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.85□□□□□ -1.79
NPHS1O60500 AP001148.1-201ENST00000624124 2359 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
NPHS1O60500 AC009541.1-201ENST00000438279 2662 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 RNU6-778P-201ENST00000363269 103 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 RNA5SP399-201ENST00000364003 117 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 RN7SKP280-201ENST00000364196 304 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 RNA5SP509-201ENST00000364577 119 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 SNORA20.1-201ENST00000364790 130 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 U3.13-201ENST00000364804 214 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 Y_RNA.518-201ENST00000384552 113 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 MIR585-201ENST00000384887 94 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 RPL37P18-201ENST00000411602 243 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 CRYBB2P1-203ENST00000415709 538 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.85□□□□□ -1.79
NPHS1O60500 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHS1O60500 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 AC098831.1-201ENST00000440661 216 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 TOMM22P6-201ENST00000465035 409 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC011276.1-201ENST00000469688 323 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 RN7SL860P-201ENST00000473738 223 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 RPL23AP49-201ENST00000492925 468 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.85□□□□□ -1.79
NPHS1O60500 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 AC067942.3-201ENST00000512025 362 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 Y_RNA.706-201ENST00000516933 99 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 RN7SKP289-201ENST00000517244 295 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.85□□□□□ -1.79
NPHS1O60500 CYCSP29-201ENST00000533731 318 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC007375.1-201ENST00000554513 578 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 LINC00933-203ENST00000559812 219 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC090877.1-201ENST00000561418 344 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.85□□□□□ -1.79
NPHS1O60500 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.85□□□□□ -1.79
NPHS1O60500 AC020895.1-201ENST00000595362 272 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC024153.1-201ENST00000603103 365 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AL355877.2-201ENST00000603670 358 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AL356218.2-201ENST00000605264 187 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 MIR6868-201ENST00000611215 58 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC023043.4-201ENST00000612081 449 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
NPHS1O60500 U6.92-201ENST00000636464 89 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 AC241585.2-209ENST00000638217 143 ntBASIC3.85□□□□□ -1.79
NPHS1O60500 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
NPHS1O60500 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
NPHS1O60500 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.84□□□□□ -1.79
NPHS1O60500 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
NPHS1O60500 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.84□□□□□ -1.79
NPHS1O60500 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.84□□□□□ -1.79
NPHS1O60500 MIR383-201ENST00000362257 73 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 RNU6-212P-201ENST00000362642 104 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 RNU6-942P-201ENST00000363002 107 ntBASIC3.84□□□□□ -1.79
NPHS1O60500 RNU2-71P-201ENST00000411395 189 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms