Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV13-1A0A0B4J241 AC005332.6-201ENST00000613178 446 ntBASIC0.72□□□□□ -2.29
TRAV13-1A0A0B4J241 AC012676.2-201ENST00000619258 186 ntBASIC0.72□□□□□ -2.29
TRAV13-1A0A0B4J241 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.72□□□□□ -2.29
TRAV13-1A0A0B4J241 AC241585.2-209ENST00000638217 143 ntBASIC0.72□□□□□ -2.29
TRAV13-1A0A0B4J241 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV13-1A0A0B4J241 RNU6-792P-201ENST00000363490 107 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-288P-201ENST00000363690 104 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 RNA5SP493-201ENST00000364115 91 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 U6.112-201ENST00000384129 70 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-952P-201ENST00000391164 108 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 MIR1261-201ENST00000408659 82 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU4-62P-201ENST00000410125 130 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 BTF3P4-201ENST00000418852 495 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 SEPT7P5-201ENST00000434048 306 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 UBE2V1P8-201ENST00000437166 265 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 MTND2P20-201ENST00000440805 661 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 GDI2P2-201ENST00000445131 608 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AL096829.2-201ENST00000446582 742 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 BTF3P15-201ENST00000455606 336 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU7-95P-201ENST00000459222 64 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AC104629.1-201ENST00000494226 508 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 HMGN1P13-201ENST00000505795 138 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 MTCYBP40-201ENST00000509390 1135 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 RN7SKP256-201ENST00000517201 314 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AC019176.1-201ENST00000518519 225 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AC087441.2-201ENST00000529141 262 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 OR6C7P-201ENST00000547875 934 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 CYP3A52P-201ENST00000563326 91 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 MIR3937-201ENST00000580135 106 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 SNORD114-21-201ENST00000606412 72 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 MIR6078-201ENST00000611069 100 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 uc_338.15-201ENST00000615470 191 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AL157770.1-201ENST00000623049 439 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 AC099654.9-201ENST00000637055 678 ntBASIC0.71□□□□□ -2.3
TRAV13-1A0A0B4J241 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-743P-201ENST00000364151 106 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 RNA5SP213-201ENST00000391031 106 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 FTH1P15-201ENST00000406984 280 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AC069282.1-201ENST00000411911 526 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 MTND2P4-201ENST00000445034 1004 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 SEPT14P24-201ENST00000447236 180 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AC114982.1-201ENST00000469402 321 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AC023538.1-201ENST00000534576 736 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 MIR3945-201ENST00000581853 98 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AL391813.2-201ENST00000609113 322 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AC093648.1-201ENST00000623546 606 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AP003485.1-201ENST00000625093 753 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 AC068205.3-201ENST00000636385 468 ntBASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
TRAV13-1A0A0B4J241 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-529P-201ENST00000363383 104 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU1-124P-201ENST00000363861 145 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 SNORA29-201ENST00000384183 140 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-160P-201ENST00000384591 107 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-1222P-201ENST00000384615 107 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 RPL21P24-201ENST00000413752 448 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 EIF1P1-201ENST00000421436 341 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 RPS6P15-201ENST00000431996 751 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AL591806.2-201ENST00000433122 173 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 MTND4P6-201ENST00000438297 472 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 PRPS1P1-201ENST00000445305 876 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 HMGN2P18-201ENST00000450680 270 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 RPL30P12-201ENST00000474666 353 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AC087343.1-201ENST00000477341 475 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 SNORA31.3-201ENST00000516029 96 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AC009902.1-201ENST00000519351 183 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 HIGD1AP17-201ENST00000554576 276 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 AC005786.1-201ENST00000588553 154 ntBASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TRAV13-1A0A0B4J241 MIR16-2-201ENST00000362117 81 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-650P-201ENST00000365658 111 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 RNU6-296P-201ENST00000384608 107 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 SNORD65.1-201ENST00000390889 71 ntBASIC0.68□□□□□ -2.3
TRAV13-1A0A0B4J241 SNORA17.3-201ENST00000391159 129 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 179.9 ms