Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.7□□□□□ -1.82
PNKPQ96T60 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.69□□□□□ -1.82
PNKPQ96T60 SRP72P2-201ENST00000344851 1979 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC138393.1-203ENST00000327086 343 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 RNU6-266P-201ENST00000364225 107 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 MIR606-201ENST00000384851 96 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AC245054.2-201ENST00000415639 319 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PNKPQ96T60 AL158156.1-201ENST00000422509 473 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 RPL23AP69-201ENST00000431134 458 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.69□□□□□ -1.82
PNKPQ96T60 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.69□□□□□ -1.82
PNKPQ96T60 RBMY2UP-201ENST00000453474 324 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 Y_RNA.653-201ENST00000459091 95 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AC130509.1-201ENST00000464158 433 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.69□□□□□ -1.82
PNKPQ96T60 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.69□□□□□ -1.82
PNKPQ96T60 RNU2-27P-201ENST00000516185 142 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC025423.5-201ENST00000550230 219 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC012182.1-201ENST00000570133 895 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC006270.2-201ENST00000578523 652 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 MIR5690-201ENST00000583739 73 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AC098826.3-201ENST00000603823 466 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AL512643.1-201ENST00000635735 524 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PNKPQ96T60 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
PNKPQ96T60 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.69□□□□□ -1.82
PNKPQ96T60 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PNKPQ96T60 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.69□□□□□ -1.82
PNKPQ96T60 AC007496.3-201ENST00000624987 3443 ntBASIC3.69□□□□□ -1.82
PNKPQ96T60 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PNKPQ96T60 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.68□□□□□ -1.82
PNKPQ96T60 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 Y_RNA.31-201ENST00000362574 102 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 Y_RNA.197-201ENST00000364004 102 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 RNU6-128P-201ENST00000383976 107 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 RNU6-1181P-201ENST00000384191 106 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
PNKPQ96T60 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
PNKPQ96T60 USP9YP7-201ENST00000436723 430 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.68□□□□□ -1.82
PNKPQ96T60 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 USP9YP32-201ENST00000452432 430 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AC087588.1-201ENST00000462203 316 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 RPL21P10-201ENST00000463521 490 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AL163540.1-201ENST00000485382 386 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 RPS15AP34-201ENST00000487776 387 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AC090096.1-201ENST00000489168 390 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AC079140.5-201ENST00000507882 310 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 MTCYBP40-201ENST00000509390 1135 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.68□□□□□ -1.82
PNKPQ96T60 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 SNORA74D-201ENST00000516404 141 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 SNORA70.18-201ENST00000516696 98 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 Y_RNA.711-201ENST00000516993 102 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.68□□□□□ -1.82
PNKPQ96T60 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.68□□□□□ -1.82
PNKPQ96T60 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.68□□□□□ -1.82
PNKPQ96T60 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.68□□□□□ -1.82
PNKPQ96T60 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.68□□□□□ -1.82
PNKPQ96T60 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.68□□□□□ -1.82
PNKPQ96T60 MIR5692A1-201ENST00000580523 69 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 MIR3200-201ENST00000580767 85 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AL355810.1-201ENST00000614629 552 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 ATP5A1P2-202ENST00000616464 443 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AC010378.1-201ENST00000619270 362 ntBASIC3.68□□□□□ -1.82
PNKPQ96T60 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.68□□□□□ -1.82
PNKPQ96T60 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PNKPQ96T60 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
PNKPQ96T60 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
PNKPQ96T60 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PNKPQ96T60 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
PNKPQ96T60 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PNKPQ96T60 RNU6-1167P-201ENST00000363227 94 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 Y_RNA.395-201ENST00000383945 109 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 Y_RNA.473-201ENST00000384333 102 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 RNU6-310P-201ENST00000384655 107 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 RNU6-308P-201ENST00000390957 107 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
PNKPQ96T60 AC245291.1-201ENST00000419501 328 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.67□□□□□ -1.82
PNKPQ96T60 RPL23AP82-202ENST00000427528 469 ntBASIC3.67□□□□□ -1.82
PNKPQ96T60 GPM6BP2-201ENST00000432046 144 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms