Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 RNU6-234P-201ENST00000365229 104 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 RNU6-637P-201ENST00000384050 107 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AL033519.2-201ENST00000403958 392 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AL445687.1-201ENST00000439946 251 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC026801.1-201ENST00000497178 464 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 HMGB1P28-201ENST00000507778 552 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC113155.1-201ENST00000511141 769 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC024589.1-201ENST00000512207 263 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 RNA5SP330-201ENST00000517096 96 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC009127.3-201ENST00000570531 403 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 MTND3P13-201ENST00000574391 343 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 UCA1.1-201ENST00000620952 75 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC104985.3-201ENST00000623479 597 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 SNORA68.1-201ENST00000364537 132 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 RNU6-432P-201ENST00000384196 109 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 RNU6-1207P-201ENST00000384343 107 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 RNU6-1000P-201ENST00000391066 106 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 MIR888-201ENST00000401186 77 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC068533.2-201ENST00000411872 306 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 C1DP1-201ENST00000426049 402 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC112198.4-201ENST00000515450 351 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 CYCSP26-201ENST00000534107 320 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AL132857.1-201ENST00000555180 708 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AL139344.1-201ENST00000605228 195 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC079395.3-201ENST00000615161 484 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AC245884.12-201ENST00000615364 59 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AP000720.1-201ENST00000625091 483 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 LINC02211-204ENST00000642024 1070 ntBASIC1.66□□□□□ -2.14
SHANK3Q9BYB0 AL161722.3-201ENST00000605789 2983 ntBASIC1.65□□□□□ -2.14
SHANK3Q9BYB0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC007785.2-201ENST00000598627 1916 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC092447.10-201ENST00000620607 1652 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AL590084.2-201ENST00000401481 382 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 GTF2IP3-201ENST00000433887 494 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 UBE2FP3-201ENST00000436366 524 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 MTND5P14-201ENST00000441481 1267 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AL136380.1-201ENST00000447970 162 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC138853.1-201ENST00000503549 823 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 HMGB3P17-201ENST00000504195 649 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC114786.4-201ENST00000508771 728 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC105313.1-201ENST00000509121 353 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC114797.1-201ENST00000514003 728 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AP003497.1-201ENST00000528472 562 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 OR6C7P-201ENST00000547875 934 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC009712.1-201ENST00000564938 316 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 AP000676.3-201ENST00000623299 569 ntBASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
SHANK3Q9BYB0 DHFRP6-201ENST00000401776 268 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL136310.1-201ENST00000404926 654 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL139421.1-201ENST00000423010 169 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 MICF-203ENST00000432679 129 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 SNRPEP7-201ENST00000438350 220 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 MTND1P31-201ENST00000449206 961 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC092989.1-201ENST00000481235 277 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL160314.1-201ENST00000490836 438 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC022447.3-201ENST00000506865 495 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC022447.1-201ENST00000515358 464 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 RNA5SP216-201ENST00000516111 123 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 RNU6-714P-201ENST00000516963 103 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 MTND1P36-201ENST00000522384 936 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 NACAP3-201ENST00000552100 481 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 MIR3122-201ENST00000577243 73 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL158163.2-201ENST00000619110 700 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AC008443.7-201ENST00000622195 246 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL138713.1-201ENST00000624026 2130 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 AL589743.1-201ENST00000551932 2712 ntBASIC1.64□□□□□ -2.15
SHANK3Q9BYB0 RNU5E-8P-201ENST00000363502 116 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 SNORA18.2-201ENST00000383865 132 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 Y_RNA.408-201ENST00000383987 102 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC074117.2-201ENST00000417130 397 ntBASIC1.63□□□□□ -2.15
SHANK3Q9BYB0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 251.2 ms