Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 RPS20P24-201ENST00000457473 361 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 snoU109.4-201ENST00000458953 143 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 LARP1BP2-201ENST00000486594 519 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.38□□□□□ -2.35
GAFA1Q96PS6 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.38□□□□□ -2.35
GAFA1Q96PS6 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.38□□□□□ -2.35
GAFA1Q96PS6 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.38□□□□□ -2.35
GAFA1Q96PS6 MIR4661-201ENST00000582720 75 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.38□□□□□ -2.35
GAFA1Q96PS6 AC021171.1-201ENST00000603137 706 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 RNU6-6P-201ENST00000606623 107 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 AC080013.4-201ENST00000607624 649 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.38□□□□□ -2.35
GAFA1Q96PS6 RBBP8P1-201ENST00000449447 1844 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 MTND5P11-201ENST00000511037 1812 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 SLC10A5P1-201ENST00000379063 1306 ntBASIC0.38□□□□□ -2.35
GAFA1Q96PS6 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 RNA5SP240-201ENST00000365355 128 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 HMGB1P17-201ENST00000403495 628 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 RNU2-64P-201ENST00000411315 191 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC114737.2-201ENST00000421583 173 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 FABP5P14-201ENST00000437273 393 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 MTCO1P44-201ENST00000441935 243 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AP1S2P1-201ENST00000457344 379 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 RNU6-1132P-201ENST00000459214 107 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AP001025.1-201ENST00000486139 332 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC067942.3-201ENST00000512025 362 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC067904.2-201ENST00000517322 1283 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC023158.1-201ENST00000561632 1025 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC007151.1-201ENST00000572774 483 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC073544.2-201ENST00000601155 540 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 AC010738.1-201ENST00000604970 987 ntBASIC0.37□□□□□ -2.35
GAFA1Q96PS6 RNU6-968P-201ENST00000384076 107 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 RNA5SP100-201ENST00000410903 110 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 RNA5SP59-201ENST00000410922 110 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 MTCO2P20-201ENST00000437339 673 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 RPL26P9-201ENST00000457466 433 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AC134050.1-201ENST00000495088 933 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AC025465.3-201ENST00000510570 311 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 RNA5SP436-201ENST00000516020 115 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 COPS8P3-201ENST00000526024 482 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AC125611.1-201ENST00000549563 229 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AC002400.1-201ENST00000569310 726 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 FAM60CP-201ENST00000591086 664 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 AL365204.3-201ENST00000612448 685 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 MIR5739-201ENST00000619803 80 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.36□□□□□ -2.35
GAFA1Q96PS6 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.36□□□□□ -2.35
GAFA1Q96PS6 ELL2P3-201ENST00000457883 1602 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.35□□□□□ -2.35
GAFA1Q96PS6 Y_RNA.122-201ENST00000363331 96 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 RNU1-139P-201ENST00000391307 165 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 RNU6-733P-201ENST00000410759 104 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 C1DP1-201ENST00000426049 402 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AL035410.1-201ENST00000427409 427 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AL590383.1-201ENST00000428602 75 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 RPL7P34-201ENST00000433316 712 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC027119.1-201ENST00000440877 241 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC004865.1-201ENST00000442276 1003 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AL353691.1-201ENST00000451332 387 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 VPS26AP1-201ENST00000483197 979 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC136628.3-201ENST00000521868 290 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC0.35□□□□□ -2.35
GAFA1Q96PS6 SNORA77B-201ENST00000578179 125 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC015688.2-201ENST00000584523 262 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 SNRPGP17-201ENST00000603780 214 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AP000238.1-201ENST00000608759 426 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AL021879.1-201ENST00000611756 288 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC243829.3-201ENST00000622177 108 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC027335.2-201ENST00000624030 375 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 AC106730.3-201ENST00000624568 641 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 ZNF663P-202ENST00000641770 1131 ntBASIC0.35□□□□□ -2.35
GAFA1Q96PS6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
GAFA1Q96PS6 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
GAFA1Q96PS6 OR5T3-201ENST00000303059 1023 ntBASIC0.34□□□□□ -2.36
GAFA1Q96PS6 SNORD18A-201ENST00000363753 72 ntBASIC0.34□□□□□ -2.36
GAFA1Q96PS6 SNORD1A-201ENST00000364968 72 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms