Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 H3F3AP1-201ENST00000559984 334 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.64□□□□□ -1.67
NFKB1P19838 AL049539.1-201ENST00000611964 459 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.64□□□□□ -1.67
NFKB1P19838 AL365265.1-201ENST00000621045 234 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 AC006065.5-201ENST00000623427 349 ntBASIC4.64□□□□□ -1.67
NFKB1P19838 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.64□□□□□ -1.67
NFKB1P19838 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
NFKB1P19838 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.64□□□□□ -1.67
NFKB1P19838 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.64□□□□□ -1.67
NFKB1P19838 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
NFKB1P19838 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NFKB1P19838 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NFKB1P19838 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NFKB1P19838 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NFKB1P19838 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NFKB1P19838 BX322639.1-202ENST00000423987 2213 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 UBE2WP1-201ENST00000362030 340 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 RNA5SP235-201ENST00000365411 114 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 Y_RNA.435-201ENST00000384095 112 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 RNU6-514P-201ENST00000384208 107 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 RNU6-72P-201ENST00000384285 79 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 RNU6-1035P-201ENST00000384477 107 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
NFKB1P19838 AC011742.1-201ENST00000431448 434 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.63□□□□□ -1.67
NFKB1P19838 CYCSP32-201ENST00000440548 321 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AL353705.4-201ENST00000449661 238 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.63□□□□□ -1.67
NFKB1P19838 IFNWP4-201ENST00000453148 294 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 snoU109.2-201ENST00000459316 135 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AP000870.1-201ENST00000472927 406 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.63□□□□□ -1.67
NFKB1P19838 RNU6-1114P-201ENST00000516022 107 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.63□□□□□ -1.67
NFKB1P19838 MIR4458-201ENST00000578872 75 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.63□□□□□ -1.67
NFKB1P19838 AC140113.4-201ENST00000622087 222 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AC099506.2-201ENST00000623074 221 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AC008785.1-201ENST00000624475 456 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.63□□□□□ -1.67
NFKB1P19838 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NFKB1P19838 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.63□□□□□ -1.67
NFKB1P19838 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NFKB1P19838 OR14L1P-202ENST00000641545 3009 ntBASIC4.63□□□□□ -1.67
NFKB1P19838 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.63□□□□□ -1.67
NFKB1P19838 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.63□□□□□ -1.67
NFKB1P19838 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NFKB1P19838 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NFKB1P19838 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.62□□□□□ -1.67
NFKB1P19838 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.62□□□□□ -1.67
NFKB1P19838 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NFKB1P19838 AC092435.4-201ENST00000623012 4159 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.62□□□□□ -1.67
NFKB1P19838 Y_RNA.8-201ENST00000362353 102 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RNU6-1286P-201ENST00000383871 107 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 Y_RNA.398-201ENST00000383952 99 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RNU6-1027P-201ENST00000383998 107 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RNU6-629P-201ENST00000384061 103 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 MIR659-201ENST00000384963 97 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 MIR32-201ENST00000384965 70 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 MIR195-201ENST00000385194 87 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 MIR153-2-201ENST00000385225 87 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 SNORD12B-201ENST00000410433 91 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RAB9AP3-201ENST00000412737 573 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 AC098614.2-201ENST00000426040 255 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.62□□□□□ -1.67
NFKB1P19838 AC007919.1-201ENST00000429380 217 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 AL049745.1-201ENST00000433953 286 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RPL23AP93-201ENST00000440847 484 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 AC124916.1-201ENST00000444020 547 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.62□□□□□ -1.67
NFKB1P19838 RAB9AP1-201ENST00000449393 573 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RPL26P26-201ENST00000480251 434 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 AC091959.1-201ENST00000495857 238 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RNA5SP464-201ENST00000516251 108 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RNU7-110P-201ENST00000516891 62 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 RNA5SP165-201ENST00000517142 115 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
NFKB1P19838 ATP5J2P6-201ENST00000565203 266 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 MIR4782-201ENST00000577987 79 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 MIR4270-201ENST00000581799 70 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.62□□□□□ -1.67
NFKB1P19838 AC104465.1-201ENST00000611365 139 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 Mico1.1-201ENST00000611698 204 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.62□□□□□ -1.67
NFKB1P19838 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NFKB1P19838 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NFKB1P19838 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
NFKB1P19838 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.61□□□□□ -1.67
NFKB1P19838 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NFKB1P19838 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.61□□□□□ -1.67
NFKB1P19838 OR51H2P-202ENST00000641424 3046 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NFKB1P19838 RNA5SP361-201ENST00000362686 118 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 RN7SKP103-201ENST00000363848 320 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 RNU1-63P-201ENST00000383902 164 ntBASIC4.61□□□□□ -1.67
NFKB1P19838 Y_RNA.418-201ENST00000384029 102 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms