Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 SNORA9.2-201ENST00000365361 133 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 RNU6-851P-201ENST00000384565 107 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 MIR181B1-201ENST00000385240 110 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC068050.1-201ENST00000394891 380 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 MIR1289-1-201ENST00000408836 144 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL645937.1-202ENST00000421799 937 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 USP9YP8-201ENST00000441913 500 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC025750.2-201ENST00000442609 450 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 DDX3P2-201ENST00000446138 111 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL136380.1-201ENST00000447970 162 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC092001.1-201ENST00000453012 261 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 RNU7-23P-201ENST00000459465 62 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 RPS26P21-201ENST00000475397 348 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC096576.1-201ENST00000489014 359 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC023194.1-201ENST00000493084 308 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC091951.2-201ENST00000500762 203 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 RNU6-835P-201ENST00000516974 104 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AP000907.2-201ENST00000530827 353 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 MIR4513-201ENST00000581077 86 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC005730.3-201ENST00000583067 366 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC012507.3-201ENST00000603556 477 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC025449.1-201ENST00000603896 529 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC007621.1-201ENST00000604544 437 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL033523.1-201ENST00000605153 153 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC121334.2-201ENST00000605387 271 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL627309.6-201ENST00000606857 840 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AL161734.1-201ENST00000609720 557 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC104260.1-201ENST00000616660 539 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 AC110079.1-202ENST00000635213 138 ntBASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
DDX43Q9NXZ2 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 FAM35CP-201ENST00000554755 2470 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 RNU6-451P-201ENST00000362921 107 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 Y_RNA.573-201ENST00000384763 105 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 SNORA26.7-201ENST00000391288 122 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 RNU6-876P-201ENST00000391295 104 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 MRPL42P2-201ENST00000403169 426 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 MTATP6P18-201ENST00000417994 673 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 ATG3P1-201ENST00000419507 911 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 RPL23AP58-201ENST00000440453 469 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 MTCO2P29-201ENST00000465212 189 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AP000852.1-201ENST00000472460 573 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC010631.1-201ENST00000474150 156 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 RPL36AP51-201ENST00000487216 318 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 RNU6-875P-201ENST00000516488 106 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 RNA5SP337-201ENST00000517007 109 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 RAB11AP2-201ENST00000545905 639 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC123904.3-201ENST00000547218 814 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC093012.1-202ENST00000549403 582 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 MIR3146-201ENST00000580367 79 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 FGF7P1-201ENST00000582820 288 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 MIR4719-201ENST00000585233 84 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AL117336.2-201ENST00000602435 335 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC009161.2-201ENST00000624626 138 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 FER-210ENST00000628534 558 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 MIR6733-201ENST00000635723 61 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AC009487.2-201ENST00000420969 6821 ntBASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
DDX43Q9NXZ2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
DDX43Q9NXZ2 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms