Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU4-72P-201ENST00000410754 173 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AL161449.1-201ENST00000414531 1199 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 PPP1R11P2-201ENST00000423543 382 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 FTH1P12-201ENST00000432137 551 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AL714022.1-201ENST00000439897 151 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 IPO7P1-201ENST00000442031 636 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 RNU7-23P-201ENST00000459465 62 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 snoU109.3-201ENST00000459477 145 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC116337.2-201ENST00000477662 156 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 RPS27P21-201ENST00000486977 252 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MIR1273G-201ENST00000577677 100 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 U73023.1-201ENST00000603134 700 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 FTX_3.1-201ENST00000610451 147 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AL445264.1-201ENST00000621719 171 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC013437.2-201ENST00000639587 677 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AL390862.1-201ENST00000635467 1469 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 RNU6-741P-201ENST00000383889 107 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 RNU6-224P-201ENST00000384055 107 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MIR514A1-201ENST00000385133 98 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MIR325-201ENST00000385260 98 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 RNU6-952P-201ENST00000391164 108 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 CCNG1P1-201ENST00000406783 885 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC098614.2-201ENST00000426040 255 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 NANOGP2-201ENST00000435391 727 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC007327.1-201ENST00000447461 264 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 RNU7-136P-201ENST00000458819 69 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 ARL2BPP4-201ENST00000506854 471 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MIR514B-201ENST00000516774 80 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC036111.3-201ENST00000526389 112 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC105245.1-201ENST00000581934 244 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 MIR3616-201ENST00000584070 92 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AC024060.1-201ENST00000607052 494 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 AP003399.1-201ENST00000637534 361 ntBASIC1.69□□□□□ -2.14
SHANK3Q9BYB0 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 CR848007.1-201ENST00000442354 1699 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 AL022578.1-201ENST00000439330 1433 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 RNU6-298P-201ENST00000390888 96 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 SNORA40.4-201ENST00000390971 128 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 AL049734.2-201ENST00000441066 616 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 OSTCP8-201ENST00000445117 448 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 RNU6-1132P-201ENST00000459214 107 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 RPS27P26-201ENST00000494583 239 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 AC147055.4-201ENST00000504399 745 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 AC079395.1-201ENST00000510981 262 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 RNA5SP471-201ENST00000516971 106 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 RPS15AP11-201ENST00000594193 385 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 AC109809.1-201ENST00000619665 545 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 AC019226.1-201ENST00000625666 515 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 MTND1P37-201ENST00000636562 264 ntBASIC1.68□□□□□ -2.14
SHANK3Q9BYB0 SNORD116-12-201ENST00000384468 92 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AC069282.1-201ENST00000411911 526 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AC099548.1-201ENST00000421443 426 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 MTND5P25-201ENST00000430499 799 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AL596276.1-201ENST00000434465 418 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 Z82210.1-201ENST00000440037 231 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 RPS15AP27-201ENST00000449183 343 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 MTND2P24-201ENST00000453434 806 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AL135752.1-201ENST00000479477 471 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 RNA5SP291-201ENST00000517222 105 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AC090821.2-201ENST00000523552 176 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AP005435.4-201ENST00000529514 284 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AC118942.1-201ENST00000529674 1035 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AC104072.1-201ENST00000568817 668 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AC023158.2-201ENST00000614876 543 ntBASIC1.67□□□□□ -2.14
SHANK3Q9BYB0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 340.4 ms