Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC092954.2-201ENST00000609103 430 ntBASIC2.41□□□□□ -2.02
HDAC3O15379 AC103710.1-201ENST00000610003 901 ntBASIC2.41□□□□□ -2.02
HDAC3O15379 AC090970.3-201ENST00000612566 866 ntBASIC2.41□□□□□ -2.02
HDAC3O15379 AC092794.1-201ENST00000612734 582 ntBASIC2.41□□□□□ -2.02
HDAC3O15379 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.41□□□□□ -2.02
HDAC3O15379 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.41□□□□□ -2.02
HDAC3O15379 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HDAC3O15379 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HDAC3O15379 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.4□□□□□ -2.03
HDAC3O15379 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.4□□□□□ -2.03
HDAC3O15379 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.4□□□□□ -2.03
HDAC3O15379 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
HDAC3O15379 SNORA36C-201ENST00000384289 132 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 RNU6-1072P-201ENST00000384703 107 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 RNU6-443P-201ENST00000384780 107 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 MIR767-201ENST00000390228 109 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 FCF1P9-201ENST00000412546 282 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.4□□□□□ -2.03
HDAC3O15379 AC091390.3-201ENST00000426478 338 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AL365496.1-201ENST00000426885 215 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.4□□□□□ -2.03
HDAC3O15379 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.4□□□□□ -2.03
HDAC3O15379 MTND1P1-201ENST00000445453 368 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.4□□□□□ -2.03
HDAC3O15379 AC008481.1-201ENST00000463278 396 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.4□□□□□ -2.03
HDAC3O15379 RPS3AP14-201ENST00000483907 780 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC011352.1-201ENST00000512300 793 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 RNU6-506P-201ENST00000516553 94 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC087241.2-201ENST00000535801 324 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC124947.2-202ENST00000552735 133 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC106782.4-201ENST00000568264 210 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.4□□□□□ -2.03
HDAC3O15379 MIR5694-201ENST00000581190 76 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 MIR3117-201ENST00000584034 78 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.4□□□□□ -2.03
HDAC3O15379 AC068944.2-201ENST00000610373 403 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC093838.1-201ENST00000613014 469 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC006386.2-201ENST00000624491 75 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AC012005.1-201ENST00000624575 75 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AL160394.1-201ENST00000624765 724 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 AL137790.1-201ENST00000634283 177 ntBASIC2.4□□□□□ -2.03
HDAC3O15379 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.4□□□□□ -2.03
HDAC3O15379 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HDAC3O15379 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.39□□□□□ -2.03
HDAC3O15379 AC022336.2-201ENST00000568966 2538 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 RNU6-169P-201ENST00000365336 107 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 Y_RNA.372-201ENST00000365599 102 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 CALM2P3-201ENST00000400429 449 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HDAC3O15379 AC127391.1-201ENST00000411737 98 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.39□□□□□ -2.03
HDAC3O15379 ELOCP4-201ENST00000420090 333 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.39□□□□□ -2.03
HDAC3O15379 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 AC093106.2-201ENST00000428212 385 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 RPS15AP9-201ENST00000439856 381 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 USP9YP15-201ENST00000442391 422 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 MTCO3P45-201ENST00000443036 613 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 C1DP4-201ENST00000455429 424 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AC108059.3-201ENST00000456388 214 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.39□□□□□ -2.03
HDAC3O15379 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDAC3O15379 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.39□□□□□ -2.03
HDAC3O15379 SCARNA24.1-201ENST00000516465 137 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 Vault.3-201ENST00000516676 95 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 FAM92A1P1-201ENST00000528023 890 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 EIF4BP1-201ENST00000554881 351 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AL391840.1-201ENST00000571144 367 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 MIR3682-201ENST00000581338 84 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 MTATP6P3-201ENST00000581686 676 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.39□□□□□ -2.03
HDAC3O15379 AL133173.2-201ENST00000614270 90 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AC072046.2-201ENST00000618366 268 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 AL158209.2-201ENST00000619266 216 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 SEPT14P19-203ENST00000633205 211 ntBASIC2.39□□□□□ -2.03
HDAC3O15379 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HDAC3O15379 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.39□□□□□ -2.03
HDAC3O15379 OR4G2P-201ENST00000328113 903 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 MIR21-201ENST00000362134 72 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 Y_RNA.22-201ENST00000362492 102 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 SNORA68.1-201ENST00000364537 132 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 SNORA20.2-201ENST00000383922 131 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 MIR23A-201ENST00000385245 73 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 RPL17P50-201ENST00000396131 546 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 MRPL42P2-201ENST00000403169 426 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 AL359634.1-202ENST00000404721 284 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 GSTA9P-201ENST00000406231 611 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 U3.37-201ENST00000408528 213 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.38□□□□□ -2.03
HDAC3O15379 RPL21P24-201ENST00000413752 448 ntBASIC2.38□□□□□ -2.03
HDAC3O15379 MTCO3P30-201ENST00000426425 670 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms