Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 Y_RNA.274-201ENST00000364714 101 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 RNU6-827P-201ENST00000365553 106 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 RNA5SP283-201ENST00000365604 119 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 RNU6-1074P-201ENST00000383995 104 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 RPL36AP10-201ENST00000421785 322 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 AL645939.1-201ENST00000453429 797 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 DEFB108E-201ENST00000524692 240 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 AC006557.5-201ENST00000603126 811 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 AL021997.2-201ENST00000615674 271 ntBASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CCDC85AQ96PX6 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 RNU6-173P-201ENST00000364215 104 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 RNA5SP175-201ENST00000364275 119 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 Y_RNA.464-201ENST00000384282 110 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 RNU6-378P-201ENST00000384324 107 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 MIR190B-201ENST00000401119 79 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 RPS29P13-201ENST00000402041 169 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AL157831.1-201ENST00000426134 473 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 MTND3P9-201ENST00000429526 346 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 COX6B1P7-201ENST00000430845 235 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AC091286.1-201ENST00000431233 461 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AL591043.1-201ENST00000432461 424 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AL445305.1-201ENST00000432577 575 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 PIGFP3-201ENST00000441918 722 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AL359073.1-201ENST00000448036 403 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AC084851.1-201ENST00000529105 249 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 MIR3936-201ENST00000584304 110 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AL161798.1-201ENST00000604630 131 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 MIR6867-201ENST00000610636 67 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AC099669.2-201ENST00000616549 437 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 AL356489.2-201ENST00000566968 3528 ntBASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
CCDC85AQ96PX6 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 RLIMP1-201ENST00000339626 1680 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 DHX9P1-201ENST00000436565 3076 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 snoU2_19.2-201ENST00000363024 80 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 RNU6-384P-201ENST00000364900 104 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR215-201ENST00000384858 110 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR134-201ENST00000385258 73 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 LAP3P1-201ENST00000403648 294 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 RN7SKP27-201ENST00000410684 333 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 RPS12P23-201ENST00000419579 400 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 AL136097.1-201ENST00000456945 913 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 RPL21P13-201ENST00000488305 481 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 RNU6-1338P-201ENST00000516328 91 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR2116-201ENST00000517221 80 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR4300-201ENST00000581016 96 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 RNF138P2-201ENST00000603490 592 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR8069-1-201ENST00000616627 86 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR8059-201ENST00000620427 81 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR8069-2-201ENST00000621412 86 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 AL450472.1-202ENST00000637286 180 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 MIR492-201ENST00000638676 116 ntBASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CCDC85AQ96PX6 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85AQ96PX6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC85AQ96PX6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CCDC85AQ96PX6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85AQ96PX6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.36□□□□□ -1.55
CCDC85AQ96PX6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CCDC85AQ96PX6 RNA5SP388-201ENST00000362584 119 ntBASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms