Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SETP11-201ENST00000473027 690 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 HMGN2P13-201ENST00000476476 274 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-1256P-201ENST00000516539 103 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 ELOCP32-201ENST00000548625 324 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 DUXAP1-201ENST00000556632 463 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.95□□□□□ -2.1
SCN4AP35499 SEPT7P9-203ENST00000604116 343 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 RNU6-6P-201ENST00000606623 107 ntBASIC1.95□□□□□ -2.1
SCN4AP35499 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.95□□□□□ -2.1
SCN4AP35499 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SCN4AP35499 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.95□□□□□ -2.1
SCN4AP35499 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SCN4AP35499 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCN4AP35499 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCN4AP35499 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SCN4AP35499 SNORA6-201ENST00000384033 151 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 RPS4XP3-201ENST00000398541 413 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN4AP35499 BX510359.4-201ENST00000423750 193 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 RPL27AP8-201ENST00000424277 446 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 BX119904.4-201ENST00000424402 301 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AC079780.1-201ENST00000428259 207 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 FGF7P5-201ENST00000441829 291 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 ERHP1-201ENST00000523006 310 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
SCN4AP35499 AC087465.1-201ENST00000560574 245 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN4AP35499 AL357094.1-201ENST00000603845 844 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AC025588.2-201ENST00000604851 466 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN4AP35499 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.94□□□□□ -2.1
SCN4AP35499 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN4AP35499 FTX_3.1-201ENST00000610451 147 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 MIR6515-201ENST00000619843 57 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 DUXAP9-208ENST00000622815 614 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SCN4AP35499 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN4AP35499 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN4AP35499 RNU6-462P-201ENST00000362659 105 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 RNA5SP139-201ENST00000364340 117 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 SNORD114-22-201ENST00000365423 72 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 RNU6-878P-201ENST00000384578 110 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN4AP35499 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.94□□□□□ -2.1
SCN4AP35499 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN4AP35499 IFNA20P-201ENST00000436840 528 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.94□□□□□ -2.1
SCN4AP35499 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.94□□□□□ -2.1
SCN4AP35499 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.94□□□□□ -2.1
SCN4AP35499 AC005297.2-201ENST00000450430 606 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AC092155.2-201ENST00000454675 477 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.94□□□□□ -2.1
SCN4AP35499 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.94□□□□□ -2.1
SCN4AP35499 CBX3P3-201ENST00000508108 532 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 RNU6-714P-201ENST00000516963 103 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AC105185.1-201ENST00000518705 535 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 SUB1P1-201ENST00000524415 382 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SCN4AP35499 DUXAP4-201ENST00000603046 613 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.94□□□□□ -2.1
SCN4AP35499 AC022709.1-201ENST00000615967 87 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AC027309.3-201ENST00000623419 351 ntBASIC1.94□□□□□ -2.1
SCN4AP35499 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
SCN4AP35499 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN4AP35499 AL596028.1-201ENST00000326971 197 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
SCN4AP35499 MIR96-201ENST00000362288 78 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 RNU1-42P-201ENST00000364033 160 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 RNU5A-2P-201ENST00000384337 116 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 MIR325-201ENST00000385260 98 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 RPL23AP29-201ENST00000397284 453 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 RN7SKP266-201ENST00000410232 287 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 RNU6-174P-201ENST00000410406 106 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AL606662.1-201ENST00000445763 553 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 MTCO1P27-201ENST00000448269 226 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN4AP35499 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.93□□□□□ -2.1
SCN4AP35499 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 RPL23AP41-201ENST00000484754 458 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN4AP35499 HMGN1P7-201ENST00000491722 313 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SCN4AP35499 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN4AP35499 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.93□□□□□ -2.1
SCN4AP35499 RNU6-798P-201ENST00000516912 103 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.93□□□□□ -2.1
SCN4AP35499 MTCO1P47-201ENST00000523889 1271 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AP003461.1-201ENST00000528866 78 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AC124947.2-202ENST00000552735 133 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.93□□□□□ -2.1
SCN4AP35499 AC107952.2-201ENST00000606048 486 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 AL353770.2-201ENST00000620024 78 ntBASIC1.93□□□□□ -2.1
SCN4AP35499 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SCN4AP35499 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
SCN4AP35499 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
SCN4AP35499 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.92□□□□□ -2.1
SCN4AP35499 RNU6-343P-201ENST00000364709 104 ntBASIC1.92□□□□□ -2.1
SCN4AP35499 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SCN4AP35499 CCNG1P1-201ENST00000406783 885 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms