Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.11□□□□□ -1.75
KRT40Q6A162 RNU6-189P-201ENST00000516120 101 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.11□□□□□ -1.75
KRT40Q6A162 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRT40Q6A162 RANP3-201ENST00000530970 276 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.11□□□□□ -1.75
KRT40Q6A162 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.11□□□□□ -1.75
KRT40Q6A162 MIR4513-201ENST00000581077 86 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 AC023043.2-201ENST00000589678 1026 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 LLPHP1-201ENST00000603571 367 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.11□□□□□ -1.75
KRT40Q6A162 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.11□□□□□ -1.75
KRT40Q6A162 AC068647.1-201ENST00000489539 2265 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRT40Q6A162 AC008725.1-201ENST00000605123 2263 ntBASIC4.11□□□□□ -1.75
KRT40Q6A162 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
KRT40Q6A162 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
KRT40Q6A162 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.11□□□□□ -1.75
KRT40Q6A162 AC010733.2-201ENST00000589496 5702 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 AL139811.1-201ENST00000424779 2299 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRT40Q6A162 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRT40Q6A162 Y_RNA.31-201ENST00000362574 102 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 Y_RNA.135-201ENST00000363439 95 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 Y_RNA.212-201ENST00000364177 102 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 RN7SKP53-201ENST00000411337 315 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 RPL37P10-201ENST00000412884 288 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 AC074085.1-201ENST00000413598 418 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 AL669831.1-202ENST00000428504 417 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 CALM2P2-201ENST00000428512 440 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT40Q6A162 FABP5P14-201ENST00000437273 393 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 RPL32P28-201ENST00000443577 397 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 MTND1P17-201ENST00000448961 204 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.1□□□□□ -1.75
KRT40Q6A162 RN7SKP24-201ENST00000515888 284 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 SNORA31.22-201ENST00000517204 135 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.1□□□□□ -1.75
KRT40Q6A162 IMMP1LP2-201ENST00000552954 492 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.1□□□□□ -1.75
KRT40Q6A162 AC006270.2-201ENST00000578523 652 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 ATP1B3P1-201ENST00000605365 821 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 AC009570.1-201ENST00000609599 745 ntBASIC4.1□□□□□ -1.75
KRT40Q6A162 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.1□□□□□ -1.75
KRT40Q6A162 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
KRT40Q6A162 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KRT40Q6A162 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT40Q6A162 HSPA8P4-201ENST00000511877 1920 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRT40Q6A162 SNORA33.2-201ENST00000365413 134 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
KRT40Q6A162 RNU6-1160P-201ENST00000384546 104 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
KRT40Q6A162 RNU2-43P-201ENST00000410306 190 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT40Q6A162 RN7SL601P-201ENST00000471221 293 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KRT40Q6A162 AL163540.1-201ENST00000485382 386 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 AP001086.1-201ENST00000494882 321 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 AC093303.1-201ENST00000514549 295 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT40Q6A162 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.09□□□□□ -1.75
KRT40Q6A162 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT40Q6A162 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.09□□□□□ -1.75
KRT40Q6A162 AC026333.2-201ENST00000542164 106 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 AC093012.1-202ENST00000549403 582 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT40Q6A162 AL138726.1-201ENST00000614873 333 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 AC022149.2-201ENST00000621061 203 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 U4.6-201ENST00000621618 127 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 AC244517.12-201ENST00000623581 663 ntBASIC4.09□□□□□ -1.75
KRT40Q6A162 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.09□□□□□ -1.75
KRT40Q6A162 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.09□□□□□ -1.75
KRT40Q6A162 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
KRT40Q6A162 AL133383.2-201ENST00000622958 2336 ntBASIC4.09□□□□□ -1.76
KRT40Q6A162 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.09□□□□□ -1.76
KRT40Q6A162 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT40Q6A162 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT40Q6A162 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.08□□□□□ -1.76
KRT40Q6A162 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
KRT40Q6A162 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KRT40Q6A162 Y_RNA.146-201ENST00000363549 102 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 RNA5SP50-201ENST00000363731 107 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 RNU6-1188P-201ENST00000363795 107 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.08□□□□□ -1.76
KRT40Q6A162 SNORD116-11-201ENST00000383882 92 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 Y_RNA.445-201ENST00000384168 102 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 SNORD70.1-201ENST00000391007 85 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 MTCYBP4-201ENST00000401524 249 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 RNA5SP120-201ENST00000410900 112 ntBASIC4.08□□□□□ -1.76
KRT40Q6A162 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.08□□□□□ -1.76
KRT40Q6A162 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.08□□□□□ -1.76
KRT40Q6A162 PMCHL1-202ENST00000423102 261 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms