Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KLF4O43474 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.09□□□□□ -1.75
KLF4O43474 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
KLF4O43474 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
KLF4O43474 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.09□□□□□ -1.75
KLF4O43474 MAPK10-372ENST00000641954 3413 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AP001148.1-201ENST00000624124 2359 ntBASIC4.09□□□□□ -1.75
KLF4O43474 RNU6-1115P-201ENST00000362490 106 ntBASIC4.09□□□□□ -1.75
KLF4O43474 RNA5SP307-201ENST00000362863 116 ntBASIC4.09□□□□□ -1.75
KLF4O43474 RNU6-105P-201ENST00000363909 104 ntBASIC4.09□□□□□ -1.75
KLF4O43474 RNU1-100P-201ENST00000365255 165 ntBASIC4.09□□□□□ -1.75
KLF4O43474 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.09□□□□□ -1.75
KLF4O43474 RNU6-639P-201ENST00000384074 107 ntBASIC4.09□□□□□ -1.75
KLF4O43474 SDHCP2-201ENST00000398565 501 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AC096664.2-201ENST00000411843 406 ntBASIC4.09□□□□□ -1.75
KLF4O43474 ELOCP19-201ENST00000411919 318 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.09□□□□□ -1.75
KLF4O43474 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.09□□□□□ -1.75
KLF4O43474 RPL23AP25-201ENST00000430973 463 ntBASIC4.09□□□□□ -1.75
KLF4O43474 HMGN2P20-201ENST00000437531 273 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.09□□□□□ -1.75
KLF4O43474 AC099799.1-201ENST00000439809 192 ntBASIC4.09□□□□□ -1.75
KLF4O43474 RNU7-23P-201ENST00000459465 62 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AC116655.1-201ENST00000508324 901 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.09□□□□□ -1.75
KLF4O43474 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.09□□□□□ -1.75
KLF4O43474 SNORA31.18-201ENST00000517043 134 ntBASIC4.09□□□□□ -1.75
KLF4O43474 SNORD116.3-201ENST00000517176 78 ntBASIC4.09□□□□□ -1.75
KLF4O43474 CR383656.8-201ENST00000549046 145 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.09□□□□□ -1.75
KLF4O43474 MIR4277-201ENST00000578298 84 ntBASIC4.09□□□□□ -1.75
KLF4O43474 AC024581.2-201ENST00000619986 252 ntBASIC4.09□□□□□ -1.75
KLF4O43474 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
KLF4O43474 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
KLF4O43474 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
KLF4O43474 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
KLF4O43474 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.09□□□□□ -1.76
KLF4O43474 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
KLF4O43474 SCN1A-220ENST00000641603 12506 ntBASIC4.08□□□□□ -1.76
KLF4O43474 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
KLF4O43474 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
KLF4O43474 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
KLF4O43474 Y_RNA.252-201ENST00000364556 101 ntBASIC4.08□□□□□ -1.76
KLF4O43474 SNORA33.2-201ENST00000365413 134 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AC068538.1-201ENST00000376856 336 ntBASIC4.08□□□□□ -1.76
KLF4O43474 Y_RNA.463-201ENST00000384271 102 ntBASIC4.08□□□□□ -1.76
KLF4O43474 SNORD116-20-201ENST00000384529 92 ntBASIC4.08□□□□□ -1.76
KLF4O43474 BX276092.3-201ENST00000424182 230 ntBASIC4.08□□□□□ -1.76
KLF4O43474 RPEP3-201ENST00000425462 676 ntBASIC4.08□□□□□ -1.76
KLF4O43474 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.08□□□□□ -1.76
KLF4O43474 MTND3P9-201ENST00000429526 346 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.08□□□□□ -1.76
KLF4O43474 AL162591.2-201ENST00000449634 317 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AC010099.1-201ENST00000455434 375 ntBASIC4.08□□□□□ -1.76
KLF4O43474 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.08□□□□□ -1.76
KLF4O43474 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.08□□□□□ -1.76
KLF4O43474 SNORA31.1-201ENST00000515993 133 ntBASIC4.08□□□□□ -1.76
KLF4O43474 SNORA31.5-201ENST00000516190 133 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AC004944.1-201ENST00000517807 3059 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.08□□□□□ -1.76
KLF4O43474 HMGN2P15-201ENST00000585707 270 ntBASIC4.08□□□□□ -1.76
KLF4O43474 7SK.7-201ENST00000603504 247 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AL356218.2-201ENST00000605264 187 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AC040896.1-201ENST00000613819 479 ntBASIC4.08□□□□□ -1.76
KLF4O43474 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
KLF4O43474 AC007546.2-201ENST00000623996 360 ntBASIC4.08□□□□□ -1.76
KLF4O43474 AC233263.6-201ENST00000631132 1963 ntBASIC4.08□□□□□ -1.76
KLF4O43474 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
KLF4O43474 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
KLF4O43474 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.07□□□□□ -1.76
KLF4O43474 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.07□□□□□ -1.76
KLF4O43474 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 SNORA22B-201ENST00000383876 138 ntBASIC4.07□□□□□ -1.76
KLF4O43474 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.07□□□□□ -1.76
KLF4O43474 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.07□□□□□ -1.76
KLF4O43474 AC005300.1-201ENST00000428401 373 ntBASIC4.07□□□□□ -1.76
KLF4O43474 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.07□□□□□ -1.76
KLF4O43474 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.07□□□□□ -1.76
KLF4O43474 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.07□□□□□ -1.76
KLF4O43474 AL441985.1-201ENST00000457727 251 ntBASIC4.07□□□□□ -1.76
KLF4O43474 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.07□□□□□ -1.76
KLF4O43474 HMGN2P13-201ENST00000476476 274 ntBASIC4.07□□□□□ -1.76
KLF4O43474 RPL17P19-201ENST00000489069 552 ntBASIC4.07□□□□□ -1.76
KLF4O43474 PPBPP1-201ENST00000510807 373 ntBASIC4.07□□□□□ -1.76
KLF4O43474 AC010265.1-201ENST00000513509 211 ntBASIC4.07□□□□□ -1.76
KLF4O43474 RNU6-1045P-201ENST00000516321 107 ntBASIC4.07□□□□□ -1.76
KLF4O43474 RN7SKP295-201ENST00000517264 153 ntBASIC4.07□□□□□ -1.76
KLF4O43474 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.07□□□□□ -1.76
KLF4O43474 AC069240.1-201ENST00000548774 375 ntBASIC4.07□□□□□ -1.76
KLF4O43474 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.07□□□□□ -1.76
KLF4O43474 AL138721.1-201ENST00000616756 179 ntBASIC4.07□□□□□ -1.76
KLF4O43474 MIR6891-201ENST00000618788 93 ntBASIC4.07□□□□□ -1.76
KLF4O43474 MIR3529-201ENST00000637713 78 ntBASIC4.07□□□□□ -1.76
KLF4O43474 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
KLF4O43474 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms