Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.53□□□□□ -2
HDAC3O15379 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
HDAC3O15379 SNORA31.21-201ENST00000517180 77 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC022878.1-201ENST00000530684 149 ntBASIC2.53□□□□□ -2
HDAC3O15379 AP002453.2-201ENST00000533503 320 ntBASIC2.53□□□□□ -2
HDAC3O15379 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 AC121758.2-201ENST00000553271 193 ntBASIC2.53□□□□□ -2
HDAC3O15379 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.53□□□□□ -2
HDAC3O15379 AC009063.1-201ENST00000563342 702 ntBASIC2.53□□□□□ -2
HDAC3O15379 MIR3609-201ENST00000582661 80 ntBASIC2.53□□□□□ -2
HDAC3O15379 MIR4325-201ENST00000583049 90 ntBASIC2.53□□□□□ -2
HDAC3O15379 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.53□□□□□ -2
HDAC3O15379 AC091805.2-201ENST00000603848 235 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC106900.2-201ENST00000604994 317 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC104237.2-201ENST00000612456 443 ntBASIC2.53□□□□□ -2
HDAC3O15379 AL589743.7-201ENST00000612637 233 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC008498.1-201ENST00000613012 531 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC015540.1-201ENST00000615828 501 ntBASIC2.53□□□□□ -2
HDAC3O15379 ATP5A1P2-202ENST00000616464 443 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC009159.1-201ENST00000618386 642 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC112204.3-201ENST00000623822 332 ntBASIC2.53□□□□□ -2
HDAC3O15379 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.53□□□□□ -2
HDAC3O15379 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
HDAC3O15379 ZNF271P-202ENST00000465539 1970 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HDAC3O15379 AC010680.1-201ENST00000590024 3590 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
HDAC3O15379 AC009902.3-201ENST00000606235 2172 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 RNU1-105P-201ENST00000363470 161 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 RNU1-112P-201ENST00000364401 164 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.52□□□□□ -2.01
HDAC3O15379 Y_RNA.516-201ENST00000384541 124 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
HDAC3O15379 Y_RNA.598-201ENST00000410480 95 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC2.52□□□□□ -2.01
HDAC3O15379 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 RPL35AP12-201ENST00000425362 338 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 C8orf59P1-201ENST00000429930 303 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC3O15379 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC3O15379 AC244505.5-201ENST00000443639 207 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 KLF3P2-201ENST00000465138 268 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 AC133134.1-201ENST00000466800 359 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.52□□□□□ -2.01
HDAC3O15379 HIGD1AP13-201ENST00000509878 289 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC3O15379 RNU6-798P-201ENST00000516912 103 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 MTCYBP20-201ENST00000524239 1129 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC3O15379 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC3O15379 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.52□□□□□ -2.01
HDAC3O15379 RPL21P5-201ENST00000554662 472 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 AL356432.3-201ENST00000568952 465 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 BNIP3P8-201ENST00000597863 560 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 AL356280.1-201ENST00000603614 379 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 AL161629.2-201ENST00000615347 275 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.52□□□□□ -2.01
HDAC3O15379 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
HDAC3O15379 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.52□□□□□ -2.01
HDAC3O15379 OR5J1P-201ENST00000313544 939 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC3O15379 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HDAC3O15379 RNU6-1074P-201ENST00000383995 104 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 RNU6-1215P-201ENST00000384441 102 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 MIR19A-201ENST00000384878 82 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 RNA5SP354-201ENST00000391247 136 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 RPS3AP36-201ENST00000398190 775 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 UBA52P6-201ENST00000399822 382 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 RPS3AP24-201ENST00000407896 734 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 RNU6-195P-201ENST00000411352 109 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 RPS3AP3-201ENST00000411933 242 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC3O15379 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.51□□□□□ -2.01
HDAC3O15379 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
HDAC3O15379 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC3O15379 AL353777.1-201ENST00000425552 326 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.51□□□□□ -2.01
HDAC3O15379 MTND6P13-201ENST00000443510 523 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 RAC1P7-201ENST00000445367 377 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC3O15379 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.51□□□□□ -2.01
HDAC3O15379 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.51□□□□□ -2.01
HDAC3O15379 MTCYBP1-201ENST00000454315 1119 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC010099.1-201ENST00000455434 375 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AP1S2P1-201ENST00000457344 379 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC3O15379 RNU6-201P-201ENST00000517100 61 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 IGLV3-17-201ENST00000519099 244 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.51□□□□□ -2.01
HDAC3O15379 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.51□□□□□ -2.01
HDAC3O15379 AP003467.2-201ENST00000520175 319 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC107934.1-201ENST00000522215 217 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AP003392.2-201ENST00000527269 208 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC3O15379 CYCSP39-201ENST00000565821 309 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC010546.1-201ENST00000569391 485 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 EIF1P4-201ENST00000572664 335 ntBASIC2.51□□□□□ -2.01
HDAC3O15379 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.51□□□□□ -2.01
HDAC3O15379 AL031176.1-201ENST00000604554 466 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms