Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AL160236.1-201ENST00000556317 195 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AC074050.1-201ENST00000563247 211 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 RPAP2P1-201ENST00000603626 1168 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AC018638.7-201ENST00000605836 1114 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AC068944.2-201ENST00000610373 403 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AC091304.6-201ENST00000619761 202 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 AC106730.3-201ENST00000624568 641 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.12□□□□□ -2.23
TRAV13-1A0A0B4J241 ZNF355P-201ENST00000427301 3216 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AP000648.3-201ENST00000623539 4507 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 RNU6-778P-201ENST00000363269 103 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 MIR95-201ENST00000385072 81 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 MTCO2P31-201ENST00000402702 684 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AL449283.1-202ENST00000418249 604 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AL590233.1-201ENST00000430017 456 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 SNRPEP9-201ENST00000436794 238 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC117503.1-201ENST00000472241 394 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 RPL22P13-201ENST00000493291 347 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC114801.2-201ENST00000503825 781 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 FAM206BP-201ENST00000510179 541 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 RNU6-528P-201ENST00000516926 100 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 MIR4648-201ENST00000580107 72 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC133794.1-201ENST00000602731 914 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 MTCYBP22-201ENST00000603788 447 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 MIR502-201ENST00000606349 86 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 MIR8081-201ENST00000611533 95 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AC006213.5-201ENST00000619673 288 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AL118508.4-201ENST00000624142 1176 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 U6.101-201ENST00000637707 76 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 ZNF876P-202ENST00000398732 1485 ntBASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.11□□□□□ -2.23
TRAV13-1A0A0B4J241 AL161722.3-201ENST00000605789 2983 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 POLHP1-201ENST00000411806 470 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 USP9YP6-201ENST00000413550 854 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 SDAD1P3-201ENST00000427380 333 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 RPL7P54-201ENST00000438336 674 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AL161651.1-201ENST00000440882 223 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AL161788.1-201ENST00000441805 169 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC118469.1-201ENST00000442943 488 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 VN1R10P-201ENST00000447106 875 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC013828.1-201ENST00000481845 158 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC018868.1-201ENST00000491307 315 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC098799.1-201ENST00000504752 800 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 RNA5SP165-201ENST00000517142 115 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC006199.1-201ENST00000548728 219 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 IMMP1LP2-201ENST00000552954 492 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC021739.1-201ENST00000559631 174 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC026271.5-201ENST00000577873 130 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 MIR3167-201ENST00000579623 85 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AL357094.1-201ENST00000603845 844 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC239868.4-201ENST00000608318 671 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 RMST_10.1-201ENST00000616309 154 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 MFSD8-213ENST00000641134 1327 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 AC006026.1-201ENST00000444025 1803 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 MTCO1P9-201ENST00000505577 1534 ntBASIC1.1□□□□□ -2.23
TRAV13-1A0A0B4J241 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
TRAV13-1A0A0B4J241 RNU6-1140P-201ENST00000410517 106 ntBASIC1.09□□□□□ -2.23
TRAV13-1A0A0B4J241 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.09□□□□□ -2.23
TRAV13-1A0A0B4J241 AL035407.1-201ENST00000429211 571 ntBASIC1.09□□□□□ -2.23
TRAV13-1A0A0B4J241 MTCO1P53-201ENST00000441633 699 ntBASIC1.09□□□□□ -2.23
TRAV13-1A0A0B4J241 AC002381.1-201ENST00000447049 280 ntBASIC1.09□□□□□ -2.23
TRAV13-1A0A0B4J241 HMGN2P10-201ENST00000448085 265 ntBASIC1.09□□□□□ -2.23
TRAV13-1A0A0B4J241 HMGN2P23-201ENST00000456759 269 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 201.8 ms