Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AP001330.4-201ENST00000604350 154 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 AL139286.2-201ENST00000606838 396 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 AC005332.10-201ENST00000612725 619 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 MIR8057-201ENST00000620957 69 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 AC079597.1-201ENST00000624306 508 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
HDAC3O15379 AC099654.13-201ENST00000639774 207 ntBASIC2.6□□□□□ -1.99
HDAC3O15379 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.6□□□□□ -1.99
HDAC3O15379 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.59□□□□□ -1.99
HDAC3O15379 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
HDAC3O15379 FRG1BP-201ENST00000278882 761 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AL161781.1-201ENST00000354277 403 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 Y_RNA.41-201ENST00000362646 102 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 RNU5E-5P-201ENST00000365379 116 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 RNU6-533P-201ENST00000384144 107 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 RNU6-297P-201ENST00000384636 107 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HDAC3O15379 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 RPS20P2-201ENST00000402520 389 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 Y_RNA.599-201ENST00000410489 109 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 RNU6-712P-201ENST00000410558 100 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.59□□□□□ -1.99
HDAC3O15379 AC099677.1-201ENST00000420575 175 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.59□□□□□ -1.99
HDAC3O15379 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.59□□□□□ -1.99
HDAC3O15379 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.59□□□□□ -1.99
HDAC3O15379 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.59□□□□□ -1.99
HDAC3O15379 MTND1P34-201ENST00000438556 671 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HDAC3O15379 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.59□□□□□ -1.99
HDAC3O15379 AL592447.1-201ENST00000447592 540 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 Z82190.1-201ENST00000454534 490 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 snoU109.4-201ENST00000458953 143 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.59□□□□□ -1.99
HDAC3O15379 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.59□□□□□ -1.99
HDAC3O15379 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.59□□□□□ -1.99
HDAC3O15379 AC126177.3-201ENST00000551839 688 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.59□□□□□ -1.99
HDAC3O15379 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.59□□□□□ -1.99
HDAC3O15379 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.59□□□□□ -1.99
HDAC3O15379 AC090615.1-201ENST00000577519 154 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.59□□□□□ -1.99
HDAC3O15379 AC068790.6-201ENST00000602558 258 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AL391813.2-201ENST00000609113 322 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AC108747.1-201ENST00000609508 535 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AC104073.3-201ENST00000610942 955 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AL590099.1-201ENST00000615276 138 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 AL603839.4-201ENST00000624658 1005 ntBASIC2.59□□□□□ -1.99
HDAC3O15379 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
HDAC3O15379 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HDAC3O15379 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HDAC3O15379 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HDAC3O15379 MIR422A-201ENST00000362286 90 ntBASIC2.58□□□□□ -2
HDAC3O15379 Y_RNA.46-201ENST00000362695 102 ntBASIC2.58□□□□□ -2
HDAC3O15379 AL138885.1-201ENST00000405921 675 ntBASIC2.58□□□□□ -2
HDAC3O15379 RPS4XP7-201ENST00000406274 780 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC078974.1-201ENST00000411597 223 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC007064.1-201ENST00000412238 351 ntBASIC2.58□□□□□ -2
HDAC3O15379 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.58□□□□□ -2
HDAC3O15379 USP9YP13-201ENST00000417797 480 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC079780.1-201ENST00000428259 207 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.58□□□□□ -2
HDAC3O15379 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.58□□□□□ -2
HDAC3O15379 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.58□□□□□ -2
HDAC3O15379 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.58□□□□□ -2
HDAC3O15379 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.58□□□□□ -2
HDAC3O15379 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
HDAC3O15379 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC2.58□□□□□ -2
HDAC3O15379 AL590365.1-201ENST00000450788 243 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
HDAC3O15379 CACYBPP2-201ENST00000453625 678 ntBASIC2.58□□□□□ -2
HDAC3O15379 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.58□□□□□ -2
HDAC3O15379 snoU13.8-201ENST00000458890 104 ntBASIC2.58□□□□□ -2
HDAC3O15379 RNA5SP269-201ENST00000459032 137 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC073901.1-201ENST00000462471 408 ntBASIC2.58□□□□□ -2
HDAC3O15379 KC877373.1-201ENST00000479066 408 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC011825.1-201ENST00000484967 388 ntBASIC2.58□□□□□ -2
HDAC3O15379 RPS15AP34-201ENST00000487776 387 ntBASIC2.58□□□□□ -2
HDAC3O15379 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.58□□□□□ -2
HDAC3O15379 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.58□□□□□ -2
HDAC3O15379 AC100870.1-201ENST00000522035 505 ntBASIC2.58□□□□□ -2
HDAC3O15379 MTND4LP18-201ENST00000526864 291 ntBASIC2.58□□□□□ -2
HDAC3O15379 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.58□□□□□ -2
HDAC3O15379 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.58□□□□□ -2
HDAC3O15379 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.58□□□□□ -2
HDAC3O15379 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.58□□□□□ -2
HDAC3O15379 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.58□□□□□ -2
HDAC3O15379 AC087683.1-201ENST00000591187 441 ntBASIC2.58□□□□□ -2
HDAC3O15379 DEFB131E-202ENST00000602581 683 ntBASIC2.58□□□□□ -2
HDAC3O15379 AL035413.2-201ENST00000604801 525 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC098614.4-201ENST00000607601 462 ntBASIC2.58□□□□□ -2
HDAC3O15379 AC012150.2-201ENST00000621300 544 ntBASIC2.58□□□□□ -2
HDAC3O15379 AL353748.2-201ENST00000622148 471 ntBASIC2.58□□□□□ -2
HDAC3O15379 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
HDAC3O15379 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HDAC3O15379 TEX21P-201ENST00000447107 1476 ntBASIC2.58□□□□□ -2
HDAC3O15379 MTND5P33-201ENST00000571250 1450 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms