Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CISD1P1-201ENST00000393907 327 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 MIR934-201ENST00000401241 83 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 RN7SKP223-201ENST00000410582 62 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC008850.1-201ENST00000427546 362 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 ZYG11AP1-201ENST00000430329 837 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AL512661.1-201ENST00000434586 1253 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC003989.2-201ENST00000440224 169 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AL096803.2-201ENST00000450032 677 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 FABP5P13-201ENST00000452144 328 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 RPS20P22-201ENST00000473700 357 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC017007.3-201ENST00000479865 435 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC079203.1-201ENST00000487972 404 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC021146.2-201ENST00000504736 556 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 RNA5SP112-201ENST00000515937 99 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC024224.1-201ENST00000538284 609 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC093519.1-201ENST00000566109 298 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC022254.1-201ENST00000567857 235 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 MIR4713-201ENST00000582691 75 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 UBE2L4-201ENST00000587688 464 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC103810.8-201ENST00000607347 118 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AL138478.1-201ENST00000612252 832 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AL163051.2-201ENST00000618976 735 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 AC007490.1-201ENST00000624321 703 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 Z99571.1-201ENST00000636677 394 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 MTCO1P4-201ENST00000520516 1409 ntBASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.2□□□□□ -2.22
TRAV13-1A0A0B4J241 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 RNA5SP88-201ENST00000365560 109 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 VN1R51P-201ENST00000411675 945 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 FAM204CP-201ENST00000424489 642 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AL645568.3-201ENST00000433683 316 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 TPTE2P1-204ENST00000435256 593 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC241584.1-201ENST00000438469 1241 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 USP9YP34-201ENST00000453983 808 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 WWP1P1-201ENST00000466609 2769 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC069306.1-201ENST00000507006 843 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC107393.1-201ENST00000512403 346 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 SNORA4.4-201ENST00000515921 135 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 MIR4435-1-201ENST00000582552 80 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AP001429.1-201ENST00000602568 530 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AP003973.1-201ENST00000604639 691 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC087241.4-201ENST00000612441 480 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 uc_338.14-201ENST00000613162 166 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 AC064859.1-201ENST00000624741 174 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 MTND5P29-201ENST00000458676 1807 ntBASIC1.19□□□□□ -2.22
TRAV13-1A0A0B4J241 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 RNU6-582P-201ENST00000362989 107 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 RNA5SP212-201ENST00000391223 107 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 RPL23AP39-201ENST00000415533 405 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AL357078.2-201ENST00000416486 427 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AC008173.1-201ENST00000418901 264 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AC019178.2-201ENST00000423595 505 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AC092393.1-201ENST00000439625 742 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 SUMO2P2-201ENST00000456482 255 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 RPL30P9-201ENST00000465586 330 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 HSPE1P18-201ENST00000517602 280 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AL512310.1-201ENST00000548639 172 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 DUXAP1-201ENST00000556632 463 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 NIFKP8-201ENST00000560500 874 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AL354943.1-201ENST00000572103 781 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AC104581.2-201ENST00000572227 430 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AP001033.2-201ENST00000609701 1003 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 MIR3199-2-201ENST00000636243 86 ntBASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV13-1A0A0B4J241 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRAV13-1A0A0B4J241 SNORD48-201ENST00000364953 64 ntBASIC1.17□□□□□ -2.22
TRAV13-1A0A0B4J241 UBE2V1P2-201ENST00000397758 440 ntBASIC1.17□□□□□ -2.22
TRAV13-1A0A0B4J241 SNORA3.2-201ENST00000408221 125 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 340.4 ms