Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL138880.2-201ENST00000616214 239 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AC099506.2-201ENST00000623074 221 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 MIR4275-201ENST00000636486 87 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 AL353743.1-202ENST00000431724 1695 ntBASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
DDX43Q9NXZ2 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC093908.1-201ENST00000623125 8092 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 Y_RNA.390-201ENST00000383932 102 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 RNU6-637P-201ENST00000384050 107 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 SNORA48.5-201ENST00000391143 135 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 MIR320C1-201ENST00000408566 88 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 MRPL50P2-201ENST00000416821 482 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 USP9YP18-201ENST00000425912 695 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 ISCA1P1-201ENST00000426679 387 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 MTND1P2-201ENST00000430604 821 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 RPL23AP69-201ENST00000431134 458 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AP001025.2-201ENST00000490908 477 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AF131216.2-201ENST00000512316 564 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 IGHV3-76-201ENST00000522465 295 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 OR4H12P-201ENST00000556269 907 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 ZNF519P2-201ENST00000557032 169 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC034268.2-201ENST00000571784 482 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 MIR4325-201ENST00000583049 90 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC009977.1-201ENST00000586015 570 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 BNIP3P23-201ENST00000599655 511 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC005000.2-201ENST00000605468 310 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC092954.2-201ENST00000609103 430 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC136475.10-201ENST00000620253 385 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AL159972.1-201ENST00000625150 448 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AL157786.1-207ENST00000627771 695 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 MAPK10-322ENST00000641485 4530 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 AC004520.1-201ENST00000608362 1413 ntBASIC3.35□□□□□ -1.87
DDX43Q9NXZ2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 SDAD1P2-201ENST00000441308 2028 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RNU5E-8P-201ENST00000363502 116 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RNU6-867P-201ENST00000364956 107 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RNU5A-6P-201ENST00000384136 116 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 NDUFB4P4-201ENST00000404822 243 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 MIR1305-201ENST00000408300 86 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 Y_RNA.608-201ENST00000410647 95 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 SDCBPP3-201ENST00000419629 891 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RPL21P40-201ENST00000428586 483 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AL356867.1-201ENST00000429623 299 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC140076.1-201ENST00000449897 361 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AL121769.1-201ENST00000469473 401 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RPL30P5-201ENST00000494923 336 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC022447.3-201ENST00000506865 495 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 MTND4LP22-201ENST00000508209 276 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 MTND5P4-201ENST00000514978 288 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RNU6-718P-201ENST00000516166 105 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RNA5SP341-201ENST00000516261 117 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 RNU6-430P-201ENST00000517078 107 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 MTCO2P4-201ENST00000517968 247 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 DEFB108A-201ENST00000530110 222 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AP003122.4-201ENST00000530980 758 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 BNIP3P8-201ENST00000597863 560 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 BNIP3P30-201ENST00000601184 574 ntBASIC3.34□□□□□ -1.87
DDX43Q9NXZ2 AC091965.4-201ENST00000607691 587 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 160.4 ms