Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Gm12895-201ENSMUST00000122214 226 ntBASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Uspl1Q3ULM6 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Uspl1Q3ULM6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Uspl1Q3ULM6 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Gm9103-201ENSMUST00000119371 405 ntBASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Uspl1Q3ULM6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Uspl1Q3ULM6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Gm44729-201ENSMUST00000206759 2052 ntBASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Uspl1Q3ULM6 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Gm25406-201ENSMUST00000157599 105 ntBASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Uspl1Q3ULM6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms