Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 GVINP1-202ENST00000531871 7271 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 SNORA41-201ENST00000384675 132 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 RNA5SP241-201ENST00000391326 114 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 CYCSP33-201ENST00000414485 327 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 Z85995.1-201ENST00000415547 335 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 TOMM22P1-201ENST00000418578 312 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 RPS24P13-201ENST00000442520 397 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 FABP5P15-201ENST00000453566 214 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 RNU7-187P-201ENST00000458985 68 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 AC011005.2-201ENST00000487324 359 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 RPL21P13-201ENST00000488305 481 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 AC022493.1-201ENST00000492984 337 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 AC078918.1-201ENST00000498515 228 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 MIR3671-201ENST00000580455 88 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 AL645944.1-201ENST00000603857 493 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 AC006157.1-201ENST00000611750 366 ntBASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.33□□□□□ -1.56
TMEM88BA6NKF7 MTND4P1-201ENST00000457501 1466 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 MTND5P30-201ENST00000452896 1731 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 RNU6-463P-201ENST00000384340 107 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 RPS15AP10-201ENST00000432472 382 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AC099799.1-201ENST00000439809 192 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 NDUFB1P2-201ENST00000449477 176 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AL135752.1-201ENST00000479477 471 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AC022493.2-201ENST00000506122 481 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 SCARNA16.2-201ENST00000516520 172 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 DNAJC8P1-201ENST00000554535 372 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AC109446.1-201ENST00000566172 220 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 Z98200.1-201ENST00000607298 470 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 7SK.10-201ENST00000621414 298 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AL158163.1-201ENST00000603915 1649 ntBASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.32□□□□□ -1.56
TMEM88BA6NKF7 ZNF807-201ENST00000328088 1707 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC004656.1-201ENST00000568479 4951 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 MIR331-201ENST00000362302 94 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 Y_RNA.80-201ENST00000362996 102 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 Y_RNA.151-201ENST00000363566 112 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 RNA5SP189-201ENST00000364920 115 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 MIR607-201ENST00000385241 96 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 RPL21P65-201ENST00000406094 466 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 RNU6-985P-201ENST00000410182 104 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 RN7SKP17-201ENST00000411242 351 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC113618.1-201ENST00000416747 285 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 CEP57L1P1-201ENST00000430943 1201 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AL500522.2-201ENST00000448562 343 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 RNU6-1037P-201ENST00000459571 107 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 RPL7P5-201ENST00000471472 736 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 ENPP7P11-201ENST00000505915 627 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC008958.1-201ENST00000511047 682 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 SNORA70.24-201ENST00000517233 118 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC027369.5-201ENST00000533838 755 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 GNAI2P1-201ENST00000541815 315 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 TVP23BP1-201ENST00000557500 617 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 RN7SL290P-201ENST00000578661 300 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC018889.1-201ENST00000605372 397 ntBASIC5.31□□□□□ -1.56
TMEM88BA6NKF7 AC096577.2-201ENST00000611455 153 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 253.6 ms