Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RN7SKP46-201ENST00000515942 234 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RNA5SP519-201ENST00000516480 119 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.53□□□□□ -1.68
EPHB3P54753 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.53□□□□□ -1.68
EPHB3P54753 AL160290.3-201ENST00000604869 165 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AL021879.1-201ENST00000611756 288 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.53□□□□□ -1.68
EPHB3P54753 MIR8062-201ENST00000621515 85 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AC138627.2-201ENST00000624202 601 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 AL136313.1-201ENST00000624804 202 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 RNA5SP196-201ENST00000625967 102 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.53□□□□□ -1.68
EPHB3P54753 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
EPHB3P54753 AC022893.2-201ENST00000564832 3296 ntBASIC4.53□□□□□ -1.68
EPHB3P54753 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHB3P54753 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.52□□□□□ -1.69
EPHB3P54753 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
EPHB3P54753 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHB3P54753 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHB3P54753 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 RNU6-188P-201ENST00000364207 107 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 RNA5SP151-201ENST00000365632 117 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 Y_RNA.512-201ENST00000384518 102 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AL445189.1-201ENST00000405722 338 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AL583834.1-201ENST00000406943 343 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 MIR1271-201ENST00000408537 86 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 RNU6-101P-201ENST00000410323 104 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 SNORA74C-2-201ENST00000411179 201 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHB3P54753 EIF4EP1-201ENST00000422311 642 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 COX6B1P7-201ENST00000430845 235 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AC236972.1-201ENST00000433225 199 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHB3P54753 AL353691.1-201ENST00000451332 387 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 RPL23AP81-201ENST00000455252 467 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 DYNLL1P5-201ENST00000467158 270 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AC108751.2-201ENST00000469993 231 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AC068781.1-201ENST00000488231 618 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 HMGB1P21-201ENST00000502313 581 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 RNA5SP73-201ENST00000516744 108 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 RNU6-685P-201ENST00000517088 95 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHB3P54753 AC022790.1-201ENST00000522872 204 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHB3P54753 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.52□□□□□ -1.69
EPHB3P54753 MIR5692C1-201ENST00000585309 91 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 AC092447.9-201ENST00000603395 144 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 AC131238.1-201ENST00000617135 328 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.52□□□□□ -1.69
EPHB3P54753 AL133243.3-201ENST00000617415 3004 ntBASIC4.52□□□□□ -1.69
EPHB3P54753 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
EPHB3P54753 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
EPHB3P54753 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHB3P54753 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
EPHB3P54753 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.51□□□□□ -1.69
EPHB3P54753 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHB3P54753 RNA5SP388-201ENST00000362584 119 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 RNA5SP391-201ENST00000363456 119 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 RHOT1P2-201ENST00000366423 333 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 Y_RNA.399-201ENST00000383955 105 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
EPHB3P54753 RPL30P2-201ENST00000414021 291 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AC108032.1-201ENST00000416706 207 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 CALM2P2-201ENST00000428512 440 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AC005094.1-201ENST00000440420 368 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
EPHB3P54753 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC4.51□□□□□ -1.69
EPHB3P54753 AC112492.4-201ENST00000456549 352 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.51□□□□□ -1.69
EPHB3P54753 RPL36AP13-201ENST00000457490 317 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 SNORD97-201ENST00000459187 142 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AL591473.1-201ENST00000464297 313 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AC008571.1-201ENST00000467232 300 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AP002812.1-201ENST00000495378 474 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 SLC25A15P5-201ENST00000508033 253 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.51□□□□□ -1.69
EPHB3P54753 AC099522.1-202ENST00000514718 367 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 RNU6-1069P-201ENST00000516612 133 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 RNU6-798P-201ENST00000516912 103 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 RNU6-1092P-201ENST00000516955 87 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 RNU6-64P-201ENST00000517119 105 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 RNU1-54P-201ENST00000517181 120 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
EPHB3P54753 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.51□□□□□ -1.69
EPHB3P54753 AC023157.2-201ENST00000540596 141 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 DYNLL1P4-201ENST00000549314 266 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AC007375.1-201ENST00000554513 578 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AL121576.1-201ENST00000556055 276 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 MIR3941-201ENST00000582572 103 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 MIR4293-201ENST00000584305 78 ntBASIC4.51□□□□□ -1.69
EPHB3P54753 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.51□□□□□ -1.69
EPHB3P54753 AC004805.2-201ENST00000605382 482 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 193.1 ms