Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 IGKV3-31-201ENST00000523109 329 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 ARL2BPP5-201ENST00000523141 481 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 OR5AL2P-201ENST00000532185 920 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 CBX3P4-201ENST00000538909 354 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 EIF1AXP2-201ENST00000555940 413 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AL160281.1-201ENST00000605307 311 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AC106052.1-201ENST00000608029 497 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AC104763.3-201ENST00000613765 618 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AC073569.3-201ENST00000619055 682 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 OR1S1-201ENST00000624470 978 ntBASIC1.34□□□□□ -2.19
TRAV13-1A0A0B4J241 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
TRAV13-1A0A0B4J241 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 ADAM3A-203ENST00000461344 2157 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 RNU6-76P-201ENST00000384060 104 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AL356432.1-201ENST00000405809 419 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 RN7SKP32-201ENST00000410167 303 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 RNA5SP489-201ENST00000410986 109 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 EDDM3CP-201ENST00000415977 425 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 UBE2D3P1-201ENST00000436669 444 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 HMGB1P36-201ENST00000487709 576 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC011352.3-201ENST00000505162 593 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC008526.1-201ENST00000509149 338 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 MTCO3P42-201ENST00000509488 518 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 LTV1P1-201ENST00000510683 1237 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 MTCO3P39-201ENST00000514812 518 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 SNORA31.22-201ENST00000517204 135 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC009063.1-201ENST00000563342 702 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AL049838.1-201ENST00000563647 981 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 MIR5089-201ENST00000580047 84 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC105245.1-201ENST00000581934 244 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC243960.4-201ENST00000600532 288 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 SNRPGP19-201ENST00000603826 189 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AC007038.2-201ENST00000608095 740 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 AP001521.1-201ENST00000609150 300 ntBASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
TRAV13-1A0A0B4J241 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 ELF2P3-201ENST00000445099 1506 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 RNU6-115P-201ENST00000364310 107 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 RNU6-997P-201ENST00000384725 107 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 OR4K6P-201ENST00000416478 897 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC018630.2-202ENST00000422992 927 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 IFNA20P-201ENST00000436840 528 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 DNAJC19P4-201ENST00000440115 345 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AL929288.2-201ENST00000446368 407 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 RPL26P9-201ENST00000457466 433 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 RPS29P20-201ENST00000489592 171 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AF213884.2-201ENST00000510417 903 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 SNORA26.10-201ENST00000516427 141 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 HMGN1P28-201ENST00000521340 364 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 LINC00933-203ENST00000559812 219 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 SULT1C2P1-202ENST00000562418 459 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 DEFB122-202ENST00000569013 197 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 BPTFP1-201ENST00000579209 492 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AL356266.1-201ENST00000623311 483 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 PISRT1-201ENST00000626175 531 ntBASIC1.32□□□□□ -2.2
TRAV13-1A0A0B4J241 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms