Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 AC015724.1-201ENST00000478577 156 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 RNU6-1223P-201ENST00000517124 104 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 OSBPL9P3-201ENST00000534523 595 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AC004217.3-201ENST00000551552 878 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 ZNF92P2-201ENST00000600543 1059 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 BNIP3P4-201ENST00000604946 565 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AC003001.2-201ENST00000616294 831 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 SNORD56.4-201ENST00000363883 71 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 RNU6-629P-201ENST00000384061 103 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 RNU6-1181P-201ENST00000384191 106 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AL138880.1-201ENST00000405824 642 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 VN1R42P-201ENST00000424651 344 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 GTF2IP12-201ENST00000456547 356 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 KLRA1P-201ENST00000503499 986 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 SNORA76.2-201ENST00000517095 137 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AF279873.1-201ENST00000523393 313 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC092470.1-201ENST00000546187 132 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AL049838.1-201ENST00000563647 981 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 MIR4504-201ENST00000577413 92 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 BPTFP1-201ENST00000579209 492 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC011712.1-201ENST00000588959 234 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AL391646.1-201ENST00000603860 190 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 RMST_6.1-201ENST00000611980 203 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AL118556.2-201ENST00000614375 824 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC012150.2-201ENST00000621300 544 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 FO624990.1-201ENST00000636373 85 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC073055.1-201ENST00000456901 1621 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 RNU6-1005P-201ENST00000384519 107 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 RNU6-837P-201ENST00000391056 108 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC073264.1-201ENST00000411508 416 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 RSL24D1P8-201ENST00000434442 492 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 snoU109.4-201ENST00000458953 143 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 snoU13.3-201ENST00000459441 104 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC104472.2-201ENST00000469035 601 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC087879.1-201ENST00000474343 374 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC006390.1-201ENST00000508068 283 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 MIR4419B-201ENST00000577260 68 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AP002906.1-201ENST00000603405 233 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 MIR502-201ENST00000606349 86 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 AC112503.2-201ENST00000609005 552 ntBASIC2.2□□□□□ -2.06
SHANK3Q9BYB0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 OR4G11P-202ENST00000642116 1414 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 RNU6-1226P-201ENST00000384317 107 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 RNU6-796P-201ENST00000391086 107 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 RNU4-27P-201ENST00000410889 139 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 ARPC3P1-201ENST00000437218 533 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 BTBD7P2-201ENST00000441962 620 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 NF1P3-201ENST00000457709 450 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 RNU1-61P-201ENST00000516107 151 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 RN7SKP49-201ENST00000516675 260 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 OR8K2P-201ENST00000524645 927 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 MIR4446-201ENST00000578505 67 ntBASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SHANK3Q9BYB0 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHANK3Q9BYB0 SNORA7.1-201ENST00000363750 139 ntBASIC2.18□□□□□ -2.06
SHANK3Q9BYB0 RNU4-41P-201ENST00000364426 143 ntBASIC2.18□□□□□ -2.06
SHANK3Q9BYB0 RNU4-65P-201ENST00000410473 140 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms