Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AP005205.1-201ENST00000563503 508 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 MIR548AB-201ENST00000584917 84 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 BBIP1P1-201ENST00000602999 279 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC091805.2-201ENST00000603848 235 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC073657.2-201ENST00000605661 303 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC099778.2-201ENST00000610904 211 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AL355073.2-201ENST00000612106 557 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC068831.7-201ENST00000616954 363 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC090740.1-201ENST00000623193 2262 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC009812.4-201ENST00000569134 1805 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 AC092326.2-201ENST00000624772 1561 ntBASIC3.51□□□□□ -1.85
DDX43Q9NXZ2 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 FRG1BP-201ENST00000278882 761 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 U3.42-201ENST00000408746 214 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 CCDC58P2-201ENST00000417131 366 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC104651.1-201ENST00000427559 735 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 SNRPEP4-201ENST00000435815 279 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 DNAJC19P4-201ENST00000440115 345 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 RPL17P49-201ENST00000443728 411 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 MTND1P1-201ENST00000445453 368 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 EEF1E1P1-201ENST00000446998 430 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC093392.2-201ENST00000450682 337 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 BX322784.1-201ENST00000455793 1077 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 snoU13.8-201ENST00000458890 104 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC108860.1-201ENST00000484521 383 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 RPL7P23-201ENST00000493874 747 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC114967.1-201ENST00000504890 259 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 VN1R104P-201ENST00000505115 1009 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC026427.2-201ENST00000506228 536 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 MTCYBP43-201ENST00000513621 740 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC017037.2-201ENST00000513850 890 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC104027.1-201ENST00000521887 300 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 ERHP1-201ENST00000523006 310 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AL163153.1-201ENST00000554223 283 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 RPL21P12-201ENST00000559810 515 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 PCMTD1P2-201ENST00000565017 355 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AP001004.1-201ENST00000582468 324 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC107214.2-201ENST00000608204 634 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC107294.3-201ENST00000609211 526 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC138749.5-201ENST00000611461 208 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 uc_338.1-201ENST00000612113 180 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 SNORD39.4-201ENST00000620099 78 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC079228.1-201ENST00000624774 1049 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AC092447.7-201ENST00000422212 1621 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 AL021368.2-201ENST00000606125 5352 ntBASIC3.5□□□□□ -1.85
DDX43Q9NXZ2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 TEX21P-201ENST00000447107 1476 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 MIR148B-201ENST00000362252 99 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 RNU6-501P-201ENST00000364072 100 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 Y_RNA.234-201ENST00000364409 97 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 Y_RNA.604-201ENST00000410574 102 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 RNA5SP107-201ENST00000411358 122 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AC233728.2-201ENST00000425348 757 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AC091390.3-201ENST00000426478 338 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AC024082.2-201ENST00000434771 238 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AC006028.1-201ENST00000438379 402 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 MTATP6P13-201ENST00000438531 667 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 MIR2276-201ENST00000516886 89 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 RN7SKP57-201ENST00000517248 293 ntBASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.49□□□□□ -1.85
DDX43Q9NXZ2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 251.8 ms