Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 MIRLET7G-201ENST00000362280 84 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 MIR607-201ENST00000385241 96 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 RN7SKP101-201ENST00000411376 320 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 USP9YP27-201ENST00000418455 438 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AC004865.1-201ENST00000442276 1003 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 HMGN1P7-201ENST00000491722 313 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AC109635.4-202ENST00000531666 412 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 SETP2-201ENST00000553886 926 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AC074051.3-201ENST00000570238 358 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AL671309.1-201ENST00000603750 544 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 AP001350.1-201ENST00000601906 1524 ntBASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHANK3Q9BYB0 MTND4P23-201ENST00000447723 1363 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 MTND4P8-201ENST00000514997 1362 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 MTND4P34-201ENST00000572715 1371 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 MFSD8-213ENST00000641134 1327 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 SNORA51.2-201ENST00000364595 132 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 MIR625-201ENST00000385047 85 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AC092638.1-201ENST00000411966 1275 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 PNRC2P1-201ENST00000423940 420 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AL645568.3-201ENST00000433683 316 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AC023424.2-201ENST00000493479 777 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AC010468.3-201ENST00000508225 458 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AL137100.2-201ENST00000555786 315 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 MIR3690-201ENST00000580266 75 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 YWHAQP7-201ENST00000603536 658 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AL590099.1-201ENST00000615276 138 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AL356118.1-201ENST00000635272 1078 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 AC025263.3-201ENST00000622965 1396 ntBASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
SHANK3Q9BYB0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 OFD1P18Y-201ENST00000420889 959 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 FAM204CP-201ENST00000424489 642 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 SUMO1P4-201ENST00000429430 302 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 HMGB1P45-201ENST00000435986 653 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 KATNBL1P3-201ENST00000443475 909 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 BX248409.1-201ENST00000455497 255 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 SNORA31.11-201ENST00000516528 139 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 RNA5SP468-201ENST00000516782 93 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 HIGD1AP6-201ENST00000521833 279 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC104581.2-201ENST00000572227 430 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC005730.3-201ENST00000583067 366 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC104307.1-201ENST00000616142 196 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 ZNF37BP-203ENST00000452306 1352 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 RPS15AP7-201ENST00000439294 405 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC027338.1-201ENST00000514840 825 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC107954.1-201ENST00000565906 727 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AC091057.2-201ENST00000602594 792 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 AL354696.1-201ENST00000614652 497 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 RMST_10.1-201ENST00000616309 154 ntBASIC2.22□□□□□ -2.05
SHANK3Q9BYB0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 RNA5SP37-201ENST00000365420 130 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 RNU1-109P-201ENST00000383960 147 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 DSTNP4-201ENST00000399472 474 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 TMSB4XP8-201ENST00000402089 135 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AL133384.1-201ENST00000412744 351 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 TMSB4XP6-201ENST00000415187 135 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 TMSB4XP1-201ENST00000424567 135 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.21□□□□□ -2.06
SHANK3Q9BYB0 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 213.9 ms