Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MTCO2P33-201ENST00000402100 465 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 U3.35-201ENST00000408405 208 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RN7SKP114-201ENST00000410327 279 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RNU2-14P-201ENST00000411053 191 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RPL21P38-201ENST00000418090 167 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.17□□□□□ -1.58
NFKB1P19838 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.17□□□□□ -1.58
NFKB1P19838 AL360271.2-201ENST00000447710 161 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 AL389915.2-201ENST00000454576 441 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RN7SL172P-201ENST00000460535 303 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RN7SL222P-201ENST00000476452 299 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RPS27AP13-201ENST00000498403 237 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.17□□□□□ -1.58
NFKB1P19838 AC026784.1-201ENST00000507986 352 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 AC113155.1-201ENST00000511141 769 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.17□□□□□ -1.58
NFKB1P19838 HIGD1AP3-201ENST00000515857 278 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 RNU6-911P-201ENST00000516523 104 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.17□□□□□ -1.58
NFKB1P19838 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.17□□□□□ -1.58
NFKB1P19838 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.17□□□□□ -1.58
NFKB1P19838 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.17□□□□□ -1.58
NFKB1P19838 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.17□□□□□ -1.58
NFKB1P19838 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
NFKB1P19838 AC068790.4-201ENST00000602474 263 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 AP001282.2-201ENST00000616149 309 ntBASIC5.17□□□□□ -1.58
NFKB1P19838 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.17□□□□□ -1.58
NFKB1P19838 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
NFKB1P19838 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
NFKB1P19838 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NFKB1P19838 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.16□□□□□ -1.58
NFKB1P19838 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
NFKB1P19838 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
NFKB1P19838 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
NFKB1P19838 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NFKB1P19838 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NFKB1P19838 RNU4-44P-201ENST00000363050 141 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 RNU6-280P-201ENST00000364145 104 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
NFKB1P19838 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 RNA5SP56-201ENST00000410277 118 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 RNA5SP296-201ENST00000410523 111 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 RNU6-121P-201ENST00000410525 99 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 RNU6-325P-201ENST00000411132 105 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 RPS15AP6-201ENST00000420703 385 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 UBE2D3P2-201ENST00000424409 445 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 C4BPAP2-201ENST00000428434 478 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.16□□□□□ -1.58
NFKB1P19838 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.16□□□□□ -1.58
NFKB1P19838 AC092647.2-201ENST00000452998 253 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 RN7SL30P-201ENST00000488416 306 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 MTND3P25-201ENST00000509243 135 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
NFKB1P19838 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.16□□□□□ -1.58
NFKB1P19838 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.16□□□□□ -1.58
NFKB1P19838 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.16□□□□□ -1.58
NFKB1P19838 NDUFB4P11-201ENST00000560510 395 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.16□□□□□ -1.58
NFKB1P19838 MIR1269B-201ENST00000580405 75 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 AC004792.1-201ENST00000614523 137 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 DLEU2_2.2-201ENST00000615474 90 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 AL450472.3-201ENST00000615578 367 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.16□□□□□ -1.58
NFKB1P19838 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
NFKB1P19838 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.16□□□□□ -1.58
NFKB1P19838 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
NFKB1P19838 AC027228.2-201ENST00000567141 2154 ntBASIC5.16□□□□□ -1.58
NFKB1P19838 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
NFKB1P19838 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
NFKB1P19838 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
NFKB1P19838 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.15□□□□□ -1.58
NFKB1P19838 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
NFKB1P19838 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.15□□□□□ -1.58
NFKB1P19838 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.15□□□□□ -1.58
NFKB1P19838 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
NFKB1P19838 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.15□□□□□ -1.58
NFKB1P19838 RNY1-201ENST00000364228 113 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 Y_RNA.270-201ENST00000364693 104 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 MIR578-201ENST00000384828 96 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 SNORA77-201ENST00000408716 125 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 RNU6-1203P-201ENST00000410703 110 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 RNU2-25P-201ENST00000411041 191 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 RNU6-607P-201ENST00000411283 108 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 AC016769.2-201ENST00000414815 475 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 CYCSP10-201ENST00000417973 294 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 BX842559.1-201ENST00000419615 532 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.15□□□□□ -1.59
NFKB1P19838 AC006946.1-201ENST00000429106 328 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 MYL8P-204ENST00000431574 518 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.15□□□□□ -1.59
NFKB1P19838 ELOCP18-201ENST00000434209 337 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 AC004866.2-201ENST00000438285 481 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 RPL7L1P1-201ENST00000448259 785 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 AL139109.1-201ENST00000455491 297 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 RPS18P6-201ENST00000476880 458 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 RN7SL441P-201ENST00000492388 296 ntBASIC5.15□□□□□ -1.59
NFKB1P19838 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.15□□□□□ -1.59
NFKB1P19838 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.15□□□□□ -1.59
NFKB1P19838 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms