Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AC010186.2-204ENST00000537668 439 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 TRAV11-201ENST00000539512 339 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AC087465.1-201ENST00000560574 245 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AC007229.1-201ENST00000590455 412 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AC013553.2-201ENST00000604244 589 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AC068057.2-201ENST00000624047 895 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AL590396.2-201ENST00000636511 1041 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AL354685.2-201ENST00000448218 1447 ntBASIC1.49□□□□□ -2.17
TRAV13-1A0A0B4J241 AL049641.1-201ENST00000441055 1948 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 SNORA5B-201ENST00000363786 132 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 RNU1-91P-201ENST00000364746 163 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 RNA5SP270-201ENST00000411361 118 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 RPL35AP22-201ENST00000436855 335 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC018634.1-201ENST00000437554 401 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AL451074.3-201ENST00000437709 472 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC004383.1-201ENST00000438135 289 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC124916.1-201ENST00000444020 547 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 DDX3P2-201ENST00000446138 111 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 RPL23AP7-203ENST00000449021 469 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC108938.1-201ENST00000451204 136 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 RPS3P1-201ENST00000456781 192 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 RNA5SP281-201ENST00000516504 135 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC103783.1-201ENST00000520506 373 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 ZNF705CP-201ENST00000530515 889 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 OR11H5P-201ENST00000554039 926 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC027176.1-201ENST00000560204 514 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 SNORD39.3-201ENST00000584451 71 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AL109918.3-201ENST00000603072 338 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC012493.3-201ENST00000604494 112 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 MIR6798-201ENST00000612887 67 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AL392048.1-201ENST00000613946 534 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AC006213.4-201ENST00000616184 634 ntBASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC1.48□□□□□ -2.17
TRAV13-1A0A0B4J241 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 MIR208A-201ENST00000362287 71 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 Y_RNA.333-201ENST00000365274 102 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 HMGB1P11-201ENST00000413899 637 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 NDUFB4P7-201ENST00000423198 363 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 MTND2P21-201ENST00000436242 1042 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 RPL23AP16-201ENST00000441715 421 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 RPS26P30-201ENST00000443431 335 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 HMGB3P17-201ENST00000504195 649 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC114786.4-201ENST00000508771 728 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 MRPS17P9-201ENST00000511924 393 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC114797.1-201ENST00000514003 728 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AL391261.3-201ENST00000557194 520 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC090897.2-201ENST00000581715 130 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 HMGN2P15-201ENST00000585707 270 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 VN1R88P-201ENST00000596787 292 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC009314.1-201ENST00000603871 304 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC007938.3-201ENST00000604965 623 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AC092954.1-201ENST00000609121 445 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 AL450472.3-201ENST00000615578 367 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 CTSLP2-204ENST00000629029 392 ntBASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
TRAV13-1A0A0B4J241 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.46□□□□□ -2.18
TRAV13-1A0A0B4J241 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.46□□□□□ -2.18
TRAV13-1A0A0B4J241 RNA5SP387-201ENST00000364226 106 ntBASIC1.46□□□□□ -2.18
TRAV13-1A0A0B4J241 RNA5SP160-201ENST00000364866 120 ntBASIC1.46□□□□□ -2.18
TRAV13-1A0A0B4J241 RNU1-148P-201ENST00000384472 162 ntBASIC1.46□□□□□ -2.18
TRAV13-1A0A0B4J241 SNORA48.3-201ENST00000391081 134 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 253.7 ms