Protein–RNA interactions for Protein: Q61116

Znf235, Zinc finger protein 235, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf235Q61116 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Znf235Q61116 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Znf235Q61116 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Znf235Q61116 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC16.95■□□□□ 0.3
Znf235Q61116 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.95■□□□□ 0.3
Znf235Q61116 Gm27525-201ENSMUST00000184465 107 ntBASIC16.95■□□□□ 0.3
Znf235Q61116 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.95■□□□□ 0.3
Znf235Q61116 Gm18622-201ENSMUST00000219361 595 ntBASIC16.95■□□□□ 0.3
Znf235Q61116 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Znf235Q61116 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Znf235Q61116 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Znf235Q61116 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Znf235Q61116 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Znf235Q61116 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.94■□□□□ 0.3
Znf235Q61116 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Mir5126-201ENSMUST00000175513 77 ntBASIC16.94■□□□□ 0.3
Znf235Q61116 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Znf235Q61116 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Gm43514-201ENSMUST00000198852 424 ntBASIC16.94■□□□□ 0.3
Znf235Q61116 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC16.94■□□□□ 0.3
Znf235Q61116 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.94■□□□□ 0.3
Znf235Q61116 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Znf235Q61116 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.94■□□□□ 0.3
Znf235Q61116 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Znf235Q61116 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Znf235Q61116 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.93■□□□□ 0.3
Znf235Q61116 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC16.93■□□□□ 0.3
Znf235Q61116 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Znf235Q61116 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Znf235Q61116 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Znf235Q61116 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.93■□□□□ 0.3
Znf235Q61116 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Znf235Q61116 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Znf235Q61116 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Znf235Q61116 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Znf235Q61116 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.92■□□□□ 0.3
Znf235Q61116 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.92■□□□□ 0.3
Znf235Q61116 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Znf235Q61116 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Znf235Q61116 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Znf235Q61116 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm8825-201ENSMUST00000182565 998 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm4518-201ENSMUST00000182638 718 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.92■□□□□ 0.3
Znf235Q61116 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms