Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Gm18959-201ENSMUST00000208954 655 ntBASIC16.62■□□□□ 0.25
Thumpd3P97770 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.62■□□□□ 0.25
Thumpd3P97770 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Thumpd3P97770 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Thumpd3P97770 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Thumpd3P97770 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Thumpd3P97770 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.61■□□□□ 0.25
Thumpd3P97770 Gm17661-201ENSMUST00000170317 270 ntBASIC16.61■□□□□ 0.25
Thumpd3P97770 Gm38027-201ENSMUST00000192315 235 ntBASIC16.61■□□□□ 0.25
Thumpd3P97770 Gm37025-201ENSMUST00000195159 829 ntBASIC16.61■□□□□ 0.25
Thumpd3P97770 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Thumpd3P97770 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Thumpd3P97770 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Thumpd3P97770 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Thumpd3P97770 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.6■□□□□ 0.25
Thumpd3P97770 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Thumpd3P97770 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Thumpd3P97770 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Thumpd3P97770 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Thumpd3P97770 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Thumpd3P97770 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Thumpd3P97770 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd3P97770 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd3P97770 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Thumpd3P97770 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Thumpd3P97770 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd3P97770 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd3P97770 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.58■□□□□ 0.24
Thumpd3P97770 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.58■□□□□ 0.24
Thumpd3P97770 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Thumpd3P97770 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Thumpd3P97770 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.58■□□□□ 0.24
Thumpd3P97770 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd3P97770 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.58■□□□□ 0.24
Thumpd3P97770 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Thumpd3P97770 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.58■□□□□ 0.24
Thumpd3P97770 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms