Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cx3cr1Q9Z0D9 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cr1Q9Z0D9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cx3cr1Q9Z0D9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cr1Q9Z0D9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cr1Q9Z0D9 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cr1Q9Z0D9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Cx3cr1Q9Z0D9 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cr1Q9Z0D9 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cr1Q9Z0D9 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cx3cr1Q9Z0D9 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Cx3cr1Q9Z0D9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Cx3cr1Q9Z0D9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cx3cr1Q9Z0D9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.61■□□□□ 0.73
Cx3cr1Q9Z0D9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cr1Q9Z0D9 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cr1Q9Z0D9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cr1Q9Z0D9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.61■□□□□ 0.73
Cx3cr1Q9Z0D9 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Cx3cr1Q9Z0D9 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Cx3cr1Q9Z0D9 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Cx3cr1Q9Z0D9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.58■□□□□ 0.72
Cx3cr1Q9Z0D9 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cr1Q9Z0D9 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cr1Q9Z0D9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Cx3cr1Q9Z0D9 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cr1Q9Z0D9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Cx3cr1Q9Z0D9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cx3cr1Q9Z0D9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Cx3cr1Q9Z0D9 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
Cx3cr1Q9Z0D9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Cx3cr1Q9Z0D9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cx3cr1Q9Z0D9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cx3cr1Q9Z0D9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Cx3cr1Q9Z0D9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Cx3cr1Q9Z0D9 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.54■□□□□ 0.72
Cx3cr1Q9Z0D9 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.54■□□□□ 0.72
Cx3cr1Q9Z0D9 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.54■□□□□ 0.72
Cx3cr1Q9Z0D9 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cr1Q9Z0D9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cr1Q9Z0D9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cr1Q9Z0D9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cx3cr1Q9Z0D9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cx3cr1Q9Z0D9 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Cx3cr1Q9Z0D9 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.53■□□□□ 0.72
Cx3cr1Q9Z0D9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cx3cr1Q9Z0D9 Particl-201ENSMUST00000205370 1560 ntBASIC19.53■□□□□ 0.72
Cx3cr1Q9Z0D9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cx3cr1Q9Z0D9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cx3cr1Q9Z0D9 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.52■□□□□ 0.72
Cx3cr1Q9Z0D9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cx3cr1Q9Z0D9 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Cx3cr1Q9Z0D9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.51■□□□□ 0.71
Cx3cr1Q9Z0D9 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cx3cr1Q9Z0D9 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.51■□□□□ 0.71
Cx3cr1Q9Z0D9 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cx3cr1Q9Z0D9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cr1Q9Z0D9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.5■□□□□ 0.71
Cx3cr1Q9Z0D9 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cr1Q9Z0D9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cr1Q9Z0D9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cx3cr1Q9Z0D9 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.49■□□□□ 0.71
Cx3cr1Q9Z0D9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Cx3cr1Q9Z0D9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cx3cr1Q9Z0D9 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cx3cr1Q9Z0D9 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cx3cr1Q9Z0D9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cx3cr1Q9Z0D9 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Cx3cr1Q9Z0D9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cx3cr1Q9Z0D9 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Cx3cr1Q9Z0D9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cr1Q9Z0D9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cr1Q9Z0D9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cr1Q9Z0D9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cr1Q9Z0D9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cx3cr1Q9Z0D9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.46■□□□□ 0.71
Cx3cr1Q9Z0D9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cx3cr1Q9Z0D9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cx3cr1Q9Z0D9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cx3cr1Q9Z0D9 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.45■□□□□ 0.7
Cx3cr1Q9Z0D9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cr1Q9Z0D9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cr1Q9Z0D9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cr1Q9Z0D9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Cx3cr1Q9Z0D9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cr1Q9Z0D9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cx3cr1Q9Z0D9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cr1Q9Z0D9 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.43■□□□□ 0.7
Cx3cr1Q9Z0D9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cr1Q9Z0D9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cr1Q9Z0D9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cr1Q9Z0D9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cx3cr1Q9Z0D9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cr1Q9Z0D9 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.42■□□□□ 0.7
Cx3cr1Q9Z0D9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cr1Q9Z0D9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cr1Q9Z0D9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cx3cr1Q9Z0D9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cr1Q9Z0D9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cx3cr1Q9Z0D9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 182 ms