Protein–RNA interactions for Protein: Q9WUT7

Ccr9, C-C chemokine receptor type 9, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr9Q9WUT7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr9Q9WUT7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Ccr9Q9WUT7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Ccr9Q9WUT7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccr9Q9WUT7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Ccr9Q9WUT7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr9Q9WUT7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Ccr9Q9WUT7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Ccr9Q9WUT7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccr9Q9WUT7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Ccr9Q9WUT7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Ccr9Q9WUT7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Ccr9Q9WUT7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccr9Q9WUT7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Ccr9Q9WUT7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccr9Q9WUT7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Ccr9Q9WUT7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Ccr9Q9WUT7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.08■□□□□ 0.81
Ccr9Q9WUT7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Ccr9Q9WUT7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Ccr9Q9WUT7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Ccr9Q9WUT7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.07■□□□□ 0.8
Ccr9Q9WUT7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Ccr9Q9WUT7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccr9Q9WUT7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ccr9Q9WUT7 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ccr9Q9WUT7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr9Q9WUT7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr9Q9WUT7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr9Q9WUT7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr9Q9WUT7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr9Q9WUT7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Ccr9Q9WUT7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Ccr9Q9WUT7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Ccr9Q9WUT7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Ccr9Q9WUT7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Ccr9Q9WUT7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccr9Q9WUT7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccr9Q9WUT7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ccr9Q9WUT7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr9Q9WUT7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr9Q9WUT7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ccr9Q9WUT7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccr9Q9WUT7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ccr9Q9WUT7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ccr9Q9WUT7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ccr9Q9WUT7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr9Q9WUT7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.01■□□□□ 0.79
Ccr9Q9WUT7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr9Q9WUT7 Nkain2-201ENSMUST00000092602 558 ntBASIC20.01■□□□□ 0.79
Ccr9Q9WUT7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Ccr9Q9WUT7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ccr9Q9WUT7 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccr9Q9WUT7 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccr9Q9WUT7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Ccr9Q9WUT7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccr9Q9WUT7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccr9Q9WUT7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccr9Q9WUT7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccr9Q9WUT7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccr9Q9WUT7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccr9Q9WUT7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccr9Q9WUT7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccr9Q9WUT7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Ccr9Q9WUT7 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.95■□□□□ 0.78
Ccr9Q9WUT7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr9Q9WUT7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr9Q9WUT7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccr9Q9WUT7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccr9Q9WUT7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr9Q9WUT7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr9Q9WUT7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccr9Q9WUT7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.94■□□□□ 0.78
Ccr9Q9WUT7 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr9Q9WUT7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr9Q9WUT7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ccr9Q9WUT7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ccr9Q9WUT7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr9Q9WUT7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr9Q9WUT7 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.92■□□□□ 0.78
Ccr9Q9WUT7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccr9Q9WUT7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.92■□□□□ 0.78
Ccr9Q9WUT7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr9Q9WUT7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ccr9Q9WUT7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.91■□□□□ 0.78
Ccr9Q9WUT7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.91■□□□□ 0.78
Ccr9Q9WUT7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccr9Q9WUT7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccr9Q9WUT7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccr9Q9WUT7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccr9Q9WUT7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccr9Q9WUT7 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccr9Q9WUT7 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms