Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
ClcnkaQ9WUB7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
ClcnkaQ9WUB7 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ClcnkaQ9WUB7 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.32■■□□□ 1
ClcnkaQ9WUB7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ClcnkaQ9WUB7 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC21.31■■□□□ 1
ClcnkaQ9WUB7 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.31■■□□□ 1
ClcnkaQ9WUB7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
ClcnkaQ9WUB7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
ClcnkaQ9WUB7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ClcnkaQ9WUB7 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ClcnkaQ9WUB7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ClcnkaQ9WUB7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ClcnkaQ9WUB7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ClcnkaQ9WUB7 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.29■■□□□ 1
ClcnkaQ9WUB7 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
ClcnkaQ9WUB7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ClcnkaQ9WUB7 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.28■■□□□ 1
ClcnkaQ9WUB7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ClcnkaQ9WUB7 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.27■■□□□ 1
ClcnkaQ9WUB7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClcnkaQ9WUB7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClcnkaQ9WUB7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClcnkaQ9WUB7 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ClcnkaQ9WUB7 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.27■■□□□ 1
ClcnkaQ9WUB7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ClcnkaQ9WUB7 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ClcnkaQ9WUB7 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ClcnkaQ9WUB7 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ClcnkaQ9WUB7 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClcnkaQ9WUB7 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ClcnkaQ9WUB7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ClcnkaQ9WUB7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ClcnkaQ9WUB7 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
ClcnkaQ9WUB7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
ClcnkaQ9WUB7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ClcnkaQ9WUB7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ClcnkaQ9WUB7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
ClcnkaQ9WUB7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ClcnkaQ9WUB7 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.21■□□□□ 0.99
ClcnkaQ9WUB7 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.21■□□□□ 0.99
ClcnkaQ9WUB7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ClcnkaQ9WUB7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
ClcnkaQ9WUB7 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
ClcnkaQ9WUB7 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClcnkaQ9WUB7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ClcnkaQ9WUB7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkaQ9WUB7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkaQ9WUB7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ClcnkaQ9WUB7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.19■□□□□ 0.98
ClcnkaQ9WUB7 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkaQ9WUB7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkaQ9WUB7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ClcnkaQ9WUB7 Particl-201ENSMUST00000205370 1560 ntBASIC21.18■□□□□ 0.98
ClcnkaQ9WUB7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
ClcnkaQ9WUB7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkaQ9WUB7 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkaQ9WUB7 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkaQ9WUB7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkaQ9WUB7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
ClcnkaQ9WUB7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkaQ9WUB7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ClcnkaQ9WUB7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ClcnkaQ9WUB7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ClcnkaQ9WUB7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ClcnkaQ9WUB7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ClcnkaQ9WUB7 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ClcnkaQ9WUB7 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ClcnkaQ9WUB7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ClcnkaQ9WUB7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ClcnkaQ9WUB7 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ClcnkaQ9WUB7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClcnkaQ9WUB7 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ClcnkaQ9WUB7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClcnkaQ9WUB7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ClcnkaQ9WUB7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkaQ9WUB7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkaQ9WUB7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkaQ9WUB7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkaQ9WUB7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ClcnkaQ9WUB7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.11■□□□□ 0.97
ClcnkaQ9WUB7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ClcnkaQ9WUB7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClcnkaQ9WUB7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ClcnkaQ9WUB7 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ClcnkaQ9WUB7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ClcnkaQ9WUB7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
ClcnkaQ9WUB7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ClcnkaQ9WUB7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ClcnkaQ9WUB7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.08■□□□□ 0.97
ClcnkaQ9WUB7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ClcnkaQ9WUB7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ClcnkaQ9WUB7 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms