Protein–RNA interactions for Protein: Q9JJ57

Kcnip1, Kv channel-interacting protein 1, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnip1Q9JJ57 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Kcnip1Q9JJ57 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Kcnip1Q9JJ57 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 Particl-201ENSMUST00000205370 1560 ntBASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Kcnip1Q9JJ57 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Kcnip1Q9JJ57 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Kcnip1Q9JJ57 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kcnip1Q9JJ57 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Kcnip1Q9JJ57 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.86■□□□□ 0.77
Kcnip1Q9JJ57 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Kcnip1Q9JJ57 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kcnip1Q9JJ57 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Kcnip1Q9JJ57 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kcnip1Q9JJ57 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Kcnip1Q9JJ57 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kcnip1Q9JJ57 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kcnip1Q9JJ57 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Kcnip1Q9JJ57 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Kcnip1Q9JJ57 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Kcnip1Q9JJ57 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Kcnip1Q9JJ57 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnip1Q9JJ57 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnip1Q9JJ57 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnip1Q9JJ57 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Kcnip1Q9JJ57 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnip1Q9JJ57 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Kcnip1Q9JJ57 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnip1Q9JJ57 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.79■□□□□ 0.76
Kcnip1Q9JJ57 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Kcnip1Q9JJ57 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
Kcnip1Q9JJ57 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Kcnip1Q9JJ57 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnip1Q9JJ57 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnip1Q9JJ57 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnip1Q9JJ57 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Kcnip1Q9JJ57 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
Kcnip1Q9JJ57 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnip1Q9JJ57 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Kcnip1Q9JJ57 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnip1Q9JJ57 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnip1Q9JJ57 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Kcnip1Q9JJ57 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnip1Q9JJ57 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnip1Q9JJ57 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnip1Q9JJ57 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Kcnip1Q9JJ57 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Kcnip1Q9JJ57 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kcnip1Q9JJ57 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kcnip1Q9JJ57 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
Kcnip1Q9JJ57 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Kcnip1Q9JJ57 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Kcnip1Q9JJ57 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnip1Q9JJ57 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnip1Q9JJ57 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Kcnip1Q9JJ57 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.71■□□□□ 0.75
Kcnip1Q9JJ57 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Kcnip1Q9JJ57 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Kcnip1Q9JJ57 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Kcnip1Q9JJ57 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnip1Q9JJ57 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Kcnip1Q9JJ57 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Kcnip1Q9JJ57 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnip1Q9JJ57 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Kcnip1Q9JJ57 Nkain2-201ENSMUST00000092602 558 ntBASIC19.69■□□□□ 0.74
Kcnip1Q9JJ57 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Kcnip1Q9JJ57 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Kcnip1Q9JJ57 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnip1Q9JJ57 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnip1Q9JJ57 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Kcnip1Q9JJ57 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnip1Q9JJ57 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnip1Q9JJ57 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Kcnip1Q9JJ57 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Kcnip1Q9JJ57 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Kcnip1Q9JJ57 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip1Q9JJ57 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip1Q9JJ57 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip1Q9JJ57 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Kcnip1Q9JJ57 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms