Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssmem1Q9D9Y8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Ssmem1Q9D9Y8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Ssmem1Q9D9Y8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Ssmem1Q9D9Y8 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Ssmem1Q9D9Y8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Ssmem1Q9D9Y8 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssmem1Q9D9Y8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.04■□□□□ 0.8
Ssmem1Q9D9Y8 Gm4799-201ENSMUST00000095396 657 ntBASIC20.04■□□□□ 0.8
Ssmem1Q9D9Y8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ssmem1Q9D9Y8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Ssmem1Q9D9Y8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ssmem1Q9D9Y8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Ssmem1Q9D9Y8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ssmem1Q9D9Y8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Ssmem1Q9D9Y8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssmem1Q9D9Y8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ssmem1Q9D9Y8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Ssmem1Q9D9Y8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssmem1Q9D9Y8 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.01■□□□□ 0.79
Ssmem1Q9D9Y8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ssmem1Q9D9Y8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Ssmem1Q9D9Y8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Ssmem1Q9D9Y8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Ssmem1Q9D9Y8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Ssmem1Q9D9Y8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20■□□□□ 0.79
Ssmem1Q9D9Y8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssmem1Q9D9Y8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssmem1Q9D9Y8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ssmem1Q9D9Y8 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.99■□□□□ 0.79
Ssmem1Q9D9Y8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ssmem1Q9D9Y8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssmem1Q9D9Y8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssmem1Q9D9Y8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ssmem1Q9D9Y8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ssmem1Q9D9Y8 Gm6311-201ENSMUST00000073790 878 ntBASIC19.98■□□□□ 0.79
Ssmem1Q9D9Y8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ssmem1Q9D9Y8 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.97■□□□□ 0.79
Ssmem1Q9D9Y8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssmem1Q9D9Y8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssmem1Q9D9Y8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Ssmem1Q9D9Y8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ssmem1Q9D9Y8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ssmem1Q9D9Y8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssmem1Q9D9Y8 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.96■□□□□ 0.79
Ssmem1Q9D9Y8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ssmem1Q9D9Y8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.95■□□□□ 0.78
Ssmem1Q9D9Y8 Mir3960-201ENSMUST00000198213 73 ntBASIC19.95■□□□□ 0.78
Ssmem1Q9D9Y8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.95■□□□□ 0.78
Ssmem1Q9D9Y8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ssmem1Q9D9Y8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.93■□□□□ 0.78
Ssmem1Q9D9Y8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ssmem1Q9D9Y8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Ssmem1Q9D9Y8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssmem1Q9D9Y8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ssmem1Q9D9Y8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ssmem1Q9D9Y8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssmem1Q9D9Y8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ssmem1Q9D9Y8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ssmem1Q9D9Y8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.9■□□□□ 0.78
Ssmem1Q9D9Y8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.9■□□□□ 0.78
Ssmem1Q9D9Y8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ssmem1Q9D9Y8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ssmem1Q9D9Y8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssmem1Q9D9Y8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ssmem1Q9D9Y8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ssmem1Q9D9Y8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssmem1Q9D9Y8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssmem1Q9D9Y8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.87■□□□□ 0.77
Ssmem1Q9D9Y8 Gm45364-201ENSMUST00000210883 159 ntBASIC19.87■□□□□ 0.77
Ssmem1Q9D9Y8 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.87■□□□□ 0.77
Ssmem1Q9D9Y8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ssmem1Q9D9Y8 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.86■□□□□ 0.77
Ssmem1Q9D9Y8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.86■□□□□ 0.77
Ssmem1Q9D9Y8 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ssmem1Q9D9Y8 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ssmem1Q9D9Y8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ssmem1Q9D9Y8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ssmem1Q9D9Y8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ssmem1Q9D9Y8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ssmem1Q9D9Y8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssmem1Q9D9Y8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.83■□□□□ 0.76
Ssmem1Q9D9Y8 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssmem1Q9D9Y8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ssmem1Q9D9Y8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssmem1Q9D9Y8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssmem1Q9D9Y8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssmem1Q9D9Y8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ssmem1Q9D9Y8 Gm9812-201ENSMUST00000061934 968 ntBASIC19.82■□□□□ 0.76
Ssmem1Q9D9Y8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ssmem1Q9D9Y8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms