Protein–RNA interactions for Protein: Q9D7H3

RtcA, RNA 3'-terminal phosphate cyclase, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcAQ9D7H3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
RtcAQ9D7H3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RtcAQ9D7H3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
RtcAQ9D7H3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
RtcAQ9D7H3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
RtcAQ9D7H3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
RtcAQ9D7H3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
RtcAQ9D7H3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
RtcAQ9D7H3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
RtcAQ9D7H3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.71■■□□□ 1.23
RtcAQ9D7H3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
RtcAQ9D7H3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.71■■□□□ 1.23
RtcAQ9D7H3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
RtcAQ9D7H3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RtcAQ9D7H3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
RtcAQ9D7H3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RtcAQ9D7H3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.69■■□□□ 1.22
RtcAQ9D7H3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RtcAQ9D7H3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RtcAQ9D7H3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
RtcAQ9D7H3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RtcAQ9D7H3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RtcAQ9D7H3 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.67■■□□□ 1.22
RtcAQ9D7H3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RtcAQ9D7H3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RtcAQ9D7H3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RtcAQ9D7H3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RtcAQ9D7H3 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.66■■□□□ 1.22
RtcAQ9D7H3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.66■■□□□ 1.22
RtcAQ9D7H3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.66■■□□□ 1.22
RtcAQ9D7H3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
RtcAQ9D7H3 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RtcAQ9D7H3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RtcAQ9D7H3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RtcAQ9D7H3 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
RtcAQ9D7H3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RtcAQ9D7H3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
RtcAQ9D7H3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RtcAQ9D7H3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RtcAQ9D7H3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RtcAQ9D7H3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
RtcAQ9D7H3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RtcAQ9D7H3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RtcAQ9D7H3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.59■■□□□ 1.21
RtcAQ9D7H3 Gm4799-201ENSMUST00000095396 657 ntBASIC22.59■■□□□ 1.21
RtcAQ9D7H3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.59■■□□□ 1.21
RtcAQ9D7H3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
RtcAQ9D7H3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.59■■□□□ 1.21
RtcAQ9D7H3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
RtcAQ9D7H3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RtcAQ9D7H3 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RtcAQ9D7H3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RtcAQ9D7H3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RtcAQ9D7H3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RtcAQ9D7H3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
RtcAQ9D7H3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
RtcAQ9D7H3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RtcAQ9D7H3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RtcAQ9D7H3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RtcAQ9D7H3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
RtcAQ9D7H3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
RtcAQ9D7H3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC22.55■■□□□ 1.2
RtcAQ9D7H3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.55■■□□□ 1.2
RtcAQ9D7H3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.55■■□□□ 1.2
RtcAQ9D7H3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.55■■□□□ 1.2
RtcAQ9D7H3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RtcAQ9D7H3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RtcAQ9D7H3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RtcAQ9D7H3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.54■■□□□ 1.2
RtcAQ9D7H3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RtcAQ9D7H3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.53■■□□□ 1.2
RtcAQ9D7H3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
RtcAQ9D7H3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RtcAQ9D7H3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RtcAQ9D7H3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RtcAQ9D7H3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.52■■□□□ 1.2
RtcAQ9D7H3 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RtcAQ9D7H3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.19
RtcAQ9D7H3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RtcAQ9D7H3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RtcAQ9D7H3 Gm6311-201ENSMUST00000073790 878 ntBASIC22.5■■□□□ 1.19
RtcAQ9D7H3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
RtcAQ9D7H3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
RtcAQ9D7H3 Mir3960-201ENSMUST00000198213 73 ntBASIC22.49■■□□□ 1.19
RtcAQ9D7H3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RtcAQ9D7H3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RtcAQ9D7H3 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.48■■□□□ 1.19
RtcAQ9D7H3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RtcAQ9D7H3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RtcAQ9D7H3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.47■■□□□ 1.19
RtcAQ9D7H3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RtcAQ9D7H3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RtcAQ9D7H3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RtcAQ9D7H3 Gm45364-201ENSMUST00000210883 159 ntBASIC22.46■■□□□ 1.19
RtcAQ9D7H3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RtcAQ9D7H3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RtcAQ9D7H3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RtcAQ9D7H3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RtcAQ9D7H3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
RtcAQ9D7H3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms