Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ShpkQ9D5J6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ShpkQ9D5J6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC19.47■□□□□ 0.71
ShpkQ9D5J6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShpkQ9D5J6 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ShpkQ9D5J6 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShpkQ9D5J6 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ShpkQ9D5J6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShpkQ9D5J6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ShpkQ9D5J6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ShpkQ9D5J6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ShpkQ9D5J6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.45■□□□□ 0.7
ShpkQ9D5J6 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ShpkQ9D5J6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShpkQ9D5J6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShpkQ9D5J6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.43■□□□□ 0.7
ShpkQ9D5J6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ShpkQ9D5J6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShpkQ9D5J6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.43■□□□□ 0.7
ShpkQ9D5J6 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ShpkQ9D5J6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShpkQ9D5J6 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ShpkQ9D5J6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ShpkQ9D5J6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShpkQ9D5J6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.41■□□□□ 0.7
ShpkQ9D5J6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ShpkQ9D5J6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShpkQ9D5J6 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC19.41■□□□□ 0.7
ShpkQ9D5J6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ShpkQ9D5J6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.4■□□□□ 0.7
ShpkQ9D5J6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
ShpkQ9D5J6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShpkQ9D5J6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ShpkQ9D5J6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShpkQ9D5J6 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
ShpkQ9D5J6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
ShpkQ9D5J6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ShpkQ9D5J6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ShpkQ9D5J6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShpkQ9D5J6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ShpkQ9D5J6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShpkQ9D5J6 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShpkQ9D5J6 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShpkQ9D5J6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ShpkQ9D5J6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
ShpkQ9D5J6 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShpkQ9D5J6 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShpkQ9D5J6 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ShpkQ9D5J6 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ShpkQ9D5J6 Gm25262-201ENSMUST00000174934 133 ntBASIC19.36■□□□□ 0.69
ShpkQ9D5J6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ShpkQ9D5J6 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ShpkQ9D5J6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ShpkQ9D5J6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShpkQ9D5J6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShpkQ9D5J6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ShpkQ9D5J6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ShpkQ9D5J6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
ShpkQ9D5J6 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShpkQ9D5J6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShpkQ9D5J6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ShpkQ9D5J6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShpkQ9D5J6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ShpkQ9D5J6 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShpkQ9D5J6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ShpkQ9D5J6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ShpkQ9D5J6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
ShpkQ9D5J6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShpkQ9D5J6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShpkQ9D5J6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShpkQ9D5J6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ShpkQ9D5J6 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ShpkQ9D5J6 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ShpkQ9D5J6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShpkQ9D5J6 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.3■□□□□ 0.68
ShpkQ9D5J6 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ShpkQ9D5J6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ShpkQ9D5J6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShpkQ9D5J6 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ShpkQ9D5J6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ShpkQ9D5J6 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ShpkQ9D5J6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShpkQ9D5J6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ShpkQ9D5J6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShpkQ9D5J6 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShpkQ9D5J6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShpkQ9D5J6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ShpkQ9D5J6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ShpkQ9D5J6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms